| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02701 |
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| Symbol | cas |
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| ID | 6307931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4533334 |
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| End bp | 4535502 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642641660 |
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| Product | crispr-associated helicase Cas3 domain protein |
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| Protein accession | YP_001915497 |
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| Protein GI | 188578568 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0428162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG TCGCCGGGCA GCTGCACGAC CTGGGTAAGT ACACAGAAAA ATTTCAGGCA
CGCCTGGCAG GCGACCCGAC CAGGGTGGAC CATGCGACCT GGGGTGCACG GAAAGCCTGC
GAGCTGTATC GCAGTGGCGG AACGCTGTTG GCCTATGGCA TTGCCGGGCA TCACGCGGGG
CTGGCTGATG GACGCCGCGA CGATCTGACG TCCCGGCCAT CTCTGCATGA GCGGCTTTCG
GATGAGTACT GTGCGCATGC GTTGCCGCCG CTGCTACCAG ACTGGGAACG GGAAGTAATG
CTGCCCGCAA AGCTGGAACT ACCAACAGGA TTCAGAGGCC ACCCGCGCAC AGAGCGCCGC
GCCTTCCAGA TGACGGTCCT GGCACGCATG CTGTTCTCCT GTCTAGTAGA TGCCGATTTC
GTCGATACCG ACGATTTCTA CCGGCGCGTG GAAGGGCGCA AGACACGCGC AGAGCAGGCC
GGCACACGGC TGACACTGGA AGAATTGCGC GAACGGCTGG ACAGCCATCT GGCCGGCCTG
TCCAGCGAGC ACGGCATCAA TCCGATCCGT GCGACCATCC TGCGCCAAGC CCGGTCTAAG
GCGCACGCGC GTATCGGACT GTTCTCGCTC ACTGTCCCTA CCGGCGGTGG CAAGACACTG
GCTTCGCTTG CGTTCGCACT GGATCACGCC ATCGCCCATG GTTTACGCCG AGTGATCTAC
GTGATCCCGT TCACCAGCAT TGTCGACCAG ACGGCGCAGG TGTTCCGCAA GGCGTTAGGC
GTGCAGGACC GCGACGACGT GGTGCTGGAG CATCACAGTG CCTTCTTCGA CGATCCGGCC
AAGGCACTAC AGGCGATCGA CAAGCGCAAG CTGGCGATGG AGAACTGGGA TGCACCGATC
GTCGTCACCA CCTCGGTGCA GTTCTTCGAA AGCCTGTTCG CCGACCGCCC CTCGCGCTGC
CGCAAGCTAC ACAACATCGC CGGCAGCGTG GTGATCCTGG ACGAAGCGCA GACCCTGCCG
CAGACGCTGC TTCGCCCCTG CGTCGCGCTA CTGGACGAAC TGGCGCGCAA CTACCGGGTC
AGCCCGGTGC TGTGTACCGC CACCCAGCCC GCTCTGCGCC AGGACCAGGG CTTCCCTGGC
GGCCTCGAAC AGGTCGAGGA ACTGGTCGCA GAGCCGAAGG TGCTATATGC ACAACTACGT
CGCGTCCGGG TGCGCCATGT TGGCGCACTG GAAGACGACG CGCTGGCTGA GGAACTGCGG
CAGCGCACAC AAGTGCTGTG CATCGTCAAC AACCGACGCC ACGCCCGCGC CCTGTTCGAC
GCCATTGCCG AACAACCCGG CGCGCACCAC CTGACCACGT TGATGCACGC ACGACATCGC
AGTGCGGCGT TGACGCGGGT ACGCGAGGAG CTGAAAGCGG GCAGGCCATG CCGACTGGTC
GCAACCAGCT TGATCGAAGC CGGCGTGGAC GTGGACTTTC CGACCGTCCT GCGCGCAGAA
GCCGGCCTGG ATTCGGTGGC GCAAGCGGCA GGGCGGTGCA ATCGCGAGGG CCGGCGTCCG
ACGGATGCCA GTGAAGTGCT CGTGTTCTCC CCCGTGAACT GGCAGCCGCC ACAGGAGCTG
AAGGTCTTCA CTGAAGTCTT CCGTGAAATC GAGCGCACTC ACAGCGGCGA CCTACTGGCG
ATGGAAGCCA TCCACGCCTA TTTCCAGAGG CTGTACCGGC GCTTGGGCGA CAACCTACTG
GACGACGAAG CGATCCTGAC GCAACTGCGC ACCGCCGATC TGGGCGACCT GCCATTCGAC
ACACTGGCTC AGAAGTTCCG GATGATCCAG ACAACCATGC GCCCGCTGAT CGTGCCGTAT
GCGCCCTATG TGACCGACCG AAATGCCGCG GAGCGCGAAG TAGCGGAAGT GAACGAAGTG
CTGCGCCAAC TGGAACACGC CGACCGGATC GGCGTAGCCG GTGCTGCGCG TCGCCTGCAA
CCGTGGCTGG TACAGGTGCC CGAGCAGGCT TACAGAGCGC TATGGCAGGC GTCCGCGATT
GCGCCGATTG CGCCTGAACG CTATGGCGAG CAGTTTGTCT GCCTGCGCAA CTCGAGGCTG
TACGACGCTC GGTTCGGGTT GCATTGGGAG GATCCGCAGT TTCTGGATGC ACAAGCCCTC
TGCCCCTGA
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| Protein sequence | MARVAGQLHD LGKYTEKFQA RLAGDPTRVD HATWGARKAC ELYRSGGTLL AYGIAGHHAG
LADGRRDDLT SRPSLHERLS DEYCAHALPP LLPDWEREVM LPAKLELPTG FRGHPRTERR
AFQMTVLARM LFSCLVDADF VDTDDFYRRV EGRKTRAEQA GTRLTLEELR ERLDSHLAGL
SSEHGINPIR ATILRQARSK AHARIGLFSL TVPTGGGKTL ASLAFALDHA IAHGLRRVIY
VIPFTSIVDQ TAQVFRKALG VQDRDDVVLE HHSAFFDDPA KALQAIDKRK LAMENWDAPI
VVTTSVQFFE SLFADRPSRC RKLHNIAGSV VILDEAQTLP QTLLRPCVAL LDELARNYRV
SPVLCTATQP ALRQDQGFPG GLEQVEELVA EPKVLYAQLR RVRVRHVGAL EDDALAEELR
QRTQVLCIVN NRRHARALFD AIAEQPGAHH LTTLMHARHR SAALTRVREE LKAGRPCRLV
ATSLIEAGVD VDFPTVLRAE AGLDSVAQAA GRCNREGRRP TDASEVLVFS PVNWQPPQEL
KVFTEVFREI ERTHSGDLLA MEAIHAYFQR LYRRLGDNLL DDEAILTQLR TADLGDLPFD
TLAQKFRMIQ TTMRPLIVPY APYVTDRNAA EREVAEVNEV LRQLEHADRI GVAGAARRLQ
PWLVQVPEQA YRALWQASAI APIAPERYGE QFVCLRNSRL YDARFGLHWE DPQFLDAQAL
CP
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