Gene PXO_02700 details

Gene Information

• Locus tag: PXO_02700
• Symbol: cas5d
• ID: 6307932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4535690
• End bp: 4536304
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642641661
• Product: crispr-associated protein Cas5, dvulg subtype
• Protein accession: YP_001915498
• Protein GI: 188578569
• TIGRFAM ID: [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.417483
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTGG AGCGGGTGTC CTACGACATC ATCACGCCAT CGGCCGCGCG CGGCATCCTC 
GAAGCGATCC ACTGGAAGCC AGCGATCCGC TGGGTGGTGG ACAGCATCCA GGTCCTCAAG 
CCGATCTGCT TTGAGTCGAT CCGCCGCAAC GAAGTCGGCA GCAAGCTGTC TGCCGCCAGC 
ATCAGCAAGG CGATCAAGGC CGGGCGTACC GACGAACTGG TCAAATACGT TGAGGAAGAT 
CGGCAACAGC GTGCCGCCAC CGTGCTGCGC GAGGTCGGCT ACATCATCGC CGCGCACTTC 
GAGATGACCG ACAAGGCAGG CCCGGATGAC AACGTCGGCA AGCACCTGGA CATCTTCAAC 
CGCCGCGCAC GGCGCGGGCA GTGCTTCCAG GCGCCATGCC TTGGCACCCG CGAGTTTCCC 
GCCAGCTTCG CCCTGCTCGG CGACGACGAC ACGCCACCAG CCAGCGACCC GGCCTTGTCC 
GGCGAACGCG ACCTGGGCTG GATGCTGCAC GACATCGACT TCGCCGACGG CATGACCCCG 
CGCTTCTTTC GTGCGCGGAT GGTCGATGGG CTGGTCGCGG TGCCGCCGCC GCAGGACGGC 
GGGGTGCGCG CATGA 

 

Protein sequence

MKVERVSYDI ITPSAARGIL EAIHWKPAIR WVVDSIQVLK PICFESIRRN EVGSKLSAAS 
ISKAIKAGRT DELVKYVEED RQQRAATVLR EVGYIIAAHF EMTDKAGPDD NVGKHLDIFN 
RRARRGQCFQ APCLGTREFP ASFALLGDDD TPPASDPALS GERDLGWMLH DIDFADGMTP 
RFFRARMVDG LVAVPPPQDG GVRA