Gene PXO_02612 details

Gene Information

• Locus tag: PXO_02612
• Symbol: leuD
• ID: 6307858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4463324
• End bp: 4463971
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642641589
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001915427
• Protein GI: 188578498
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCTT TCACCCAACA CACCGGACTG GTCGCGCCTC TGGATCGCGC CAACGTCGAT 
ACCGACCAGA TCATTCCCAA GCAGTTTCTC AAGTCGATCA AGCGCACCGG CTTCGGGCCG 
AATCTGTTCG ACGAGTGGCG CTATCTGGAT ATCGGCGAAC CTGGTCGCGA CAACAGCACG 
CGCCCGCTGA ATCCGGAATT CGTGCTCAAT TTCCCGCGAT ATCAGGGCGC CAGCGTGTTG 
TTGGCACGCG AAAACTTCGG CTGCGGTTCC TCGCGCGAGC ATGCGCCGTG GGCGCTGGAC 
GAATACGGCT TTCGCGCCGT CATCGCGCCG AGCTTTGCCG ATATTTTTTA CAACAACAGC 
TTCAAGAACG GCCTGCTGCC GATCGTGCTG GCCGAAGCGG AAGTGGATGC GCTGTTCGAA 
CAGTGCCTGG CCAACGAGGG CTATCAACTC ACCGTGGATC TGGCCGCACA GCGCGTGCGC 
CGCCCCGATG GCGTGGAATA CAGTTTCGAC ATCGACGCAT TCCGCAAGCA CTGCCTGCTC 
AACGGCCTGG ACGACATCGG CCTGACCTTG CAGGAGGCCG ATGCCATCGG TCGCTTCGAG 
CAGGACCATC GCGCACGCCA ACCGTGGTTG TTTGGCGCAC TGCAGTGA 

 

Protein sequence

MTPFTQHTGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD IGEPGRDNST 
RPLNPEFVLN FPRYQGASVL LARENFGCGS SREHAPWALD EYGFRAVIAP SFADIFYNNS 
FKNGLLPIVL AEAEVDALFE QCLANEGYQL TVDLAAQRVR RPDGVEYSFD IDAFRKHCLL 
NGLDDIGLTL QEADAIGRFE QDHRARQPWL FGALQ