Gene PXO_02603 details

Gene Information

• Locus tag: PXO_02603
• Symbol: thiC
• ID: 6307848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 4452181
• End bp: 4454058
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642641579
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_001915417
• Protein GI: 188578488
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCCG CGCCTACCGT TTTGCAGCAA CAAGCCCAGT CGTTGTCCGA GGCTGTCACC 
CAACCGATTC CCGGTTCACG CAAGATCTTC GTGCAAGGCT CGCGCGCGGA TCTGCAGGTG 
CCGATGCGCG AGATCGCGTT GACGCGCACG CCCACCTTGT TCGGTGGCGA AGAGAATCCG 
CCGCTCAGCG TCTACGACAC TTCCGGGCCT TATACAGATC CGCAGGTGGC TATCGATCTG 
GCCGTTGGTC TGGCACCGCT GCGCGCGCAC TGGATTGCCG AGCGCGGCGA CACCGTCGCA 
CTGGATGGGC TGAGCTCCAG TTTCGGGCGT GGCCGCGAGC ACGATGCGCG TCTGGATGCC 
GTGCGCTTTC CGGCGCGGCG CTTGCCGCGG GTCGCGCGCG AGGGCGCCAA CGTCACCCAG 
ATGCATTACG CACGCCGCGG CATCATCACG CCGGAAATGG AGTACGTGGC GATCCGCGAA 
AATCAGCGTC TGGAAGCGGT GACCGATGCG AGCTTGCGTA AGCAGCATCC GGGCGAGGCG 
TTCGGCGCCT CGATCCAGCA GCGCATCACG CCGGAGTTCG TACGCGAGGA GATCGCACGG 
GGGCGCGCGA TCCTGCCCAA CAACATCAAT CATCCTGAAA GCGAGCCGAT GATCATCGGT 
CGCAATTTCC TCACCAAGAT CAACGCCAAC ATCGGCAACA GCGCCGTGTC TTCGGGCATT 
GCCGAAGAAG TCGAGAAGCT GGTGTGGTCG ATCCGCTGGG GCGGCGATAC GGTGATGGAT 
CTGTCCACCG GCAAGCACAT CCATGAAACG CGCGAATGGA TCATCCGCAA CTCGCCGGTG 
CCGATCGGTA CAGTGCCGAT CTATCAGGCA TTGGAAAAAG TCGACGGACG TGCCGAGGCG 
CTGACCTGGG AAATTTTCCG CGACACCTTG ATCGAACAGG CCGAACAGGG CGTGGATTAC 
TTCACCATCC ACGCCGGCGT ACTGTTGCGC TACGTACCGC TGACCGCAAA GCGGGTGACC 
GGCATCGTGT CGCGTGGCGG TTCTATCATG GCCAAGTGGT GCCTGGCGCA TCACAAGGAA 
AATTTTCTCT ATACGCACTT CGAAGACATC TGCCAGATCA TGAAGGCCTA CGACGTGGCG 
TTCTCGTTGG GCGATGGCTT ACGCCCCGGC TGCATTGCCG ACGCGAATGA CGCGGCCCAA 
TTCGGCGAGC TGGAAACGCT GGGCGAGTTG ACCAAACTGG CGTGGAAGCA CGATGTGCAA 
ACCATGATCG AAGGCCCCGG TCATGTGCCG ATGCAATTGA TCAAGGAGAA CATGGACAAG 
CAGCTGCGCG AATGCGGCGA GGCGCCGTTT TACACCCTGG GGCCGCTGAC CACCGACATC 
GCGCCGGGCT ACGACCACAT CACCAGCGCG ATCGGTGCGG CAATGATCGG CTGGTTCGGC 
ACGGCAATGC TCTGCTATGT CACTCCGAAA GAGCATCTGG GTTTGCCCAA TCGGCAGGAC 
GTGCGCGACG GCATCATGGC CTACAAGATC GCCGCGCACG CAGCCGACCT CGCCAAGGGG 
CATCCGGGCG CGCAGGTGCG CGACAACGCC CTGAGCAAGG CGCGTTTCGA GTTCCGTTGG 
GATGACCAGT TCCATCTCGG TCTGGATCCG GAAAAGGCCA AGGAGTTCCA CGACGAGACG 
CTGCCCAAGG ACGCGCACAA GCTGGCGCAC TTCTGTTCGA TGTGCGGGCC GCATTTCTGC 
TCGATGAAGA TCACCCAGGA CGTACGCGAT TACGCGGCCG AGCACGGCAT GGACGACGCG 
CAAGCGTTAT CGACAGGAAT GCAGGAGAAG TCGGCGCAGT TTCTGGCGCA AGGTGCGCAG 
GTGTATCGCC CCATGTGA 

 

Protein sequence

MNAAPTVLQQ QAQSLSEAVT QPIPGSRKIF VQGSRADLQV PMREIALTRT PTLFGGEENP 
PLSVYDTSGP YTDPQVAIDL AVGLAPLRAH WIAERGDTVA LDGLSSSFGR GREHDARLDA 
VRFPARRLPR VAREGANVTQ MHYARRGIIT PEMEYVAIRE NQRLEAVTDA SLRKQHPGEA 
FGASIQQRIT PEFVREEIAR GRAILPNNIN HPESEPMIIG RNFLTKINAN IGNSAVSSGI 
AEEVEKLVWS IRWGGDTVMD LSTGKHIHET REWIIRNSPV PIGTVPIYQA LEKVDGRAEA 
LTWEIFRDTL IEQAEQGVDY FTIHAGVLLR YVPLTAKRVT GIVSRGGSIM AKWCLAHHKE 
NFLYTHFEDI CQIMKAYDVA FSLGDGLRPG CIADANDAAQ FGELETLGEL TKLAWKHDVQ 
TMIEGPGHVP MQLIKENMDK QLRECGEAPF YTLGPLTTDI APGYDHITSA IGAAMIGWFG 
TAMLCYVTPK EHLGLPNRQD VRDGIMAYKI AAHAADLAKG HPGAQVRDNA LSKARFEFRW 
DDQFHLGLDP EKAKEFHDET LPKDAHKLAH FCSMCGPHFC SMKITQDVRD YAAEHGMDDA 
QALSTGMQEK SAQFLAQGAQ VYRPM