Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02579 |
Symbol | |
ID | 6307826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4424322 |
End bp | 4425872 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642641557 |
Product | hypothetical protein |
Protein accession | YP_001915395 |
Protein GI | 188578466 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGGCCG GACTGTGTGC ACTCGTCACC ACCAGTGCGG CCATCGCCGC AGTGCCATCG GTGGCCCAAT GCCTCACGCC TCAGCCGTGG GCGCATTCCA ACGCCGGCGT GGTTGTCGGT AACGGCACCG CGGCCAGTTG TACCGCCAGT GCACTCGCTA CCGCGGTGGC GCAGGGTGGC TATGTCACCT TCAACTGCGG TGCGAGTGCG GTCAGCATCG CCGTCAACCA GACCATCAAC ATCAGCGCCA GCACGCCAAC GGTGATCGAT GGCCAAGGCA AGATCACCCT GGACGGCGGC CAGGTCGCGC GCATCTTCCA GGTGCAGAAC GGCAATGCGC TGTCGGTGCG CAATCTCAAA CTGCAGAACG GCAGCTCCGT GCAGCCTGCA TCCAACACCC AGTACGCTCC CGGCACCTGG GGTGGCGGCG CGATCAAGGT CAGCTACCGC GGCAAGCTGG AAGTGATCAA CAGCCAGTTC CTGAGCAACC GCAGCAGCAT TGGGGGTGGC GCCATCTTCG CCGGCAGCGA TGCCGACGTG ACCATCGTCA AGAGCTCTTT TTCGAAGAAC ACCTCGTGGT TGGGCGGCGC TCTGTACACG CAGCTCAGCC GCCTGACCAT CGTCAATTCC GAGTTCGTCG GTAACCAGGC GATCAATGCA CCGGCCGGCT TCCCCGATGC CGATCAGTTC GGCAACAGCG GCGCGATCGA CACCGACGGC GCCTCGCTCG CGGGCTACCT CAACGCCGCC GCCGGTGGCG CGACGCTATC GGTGTGCGGC ACCGTGGTGC GCAACAACAC CGCAGCCAAT AGCGGCGGCG GCGCCACCCT GTGGGCGTAT GCGCCCGACA CCATCGACGT GCGTTACTCG ACCTTCGCCA ACAATATCGC CTACGGCGGC CCGGCCGGTG GTGCGCGCAT CAGCCTCGGC TTTGGCGACA CCACCCACTC CGGTACCACC ATCACCACCC CGGGCATCAT CAACGTCGAG GAAACCAGCT TCCTGTCCAA CCGCGCCGAG AAGAGCAATG CCGGCGCCCT GTACATGGAC TGCTACGGCC CGTCCTGCAA CGTCAGCAAC AGCACCTTCT ACGGTAACTA CGCCAAGGGT GTCGGCGCAG CGATTCAGCA CGTGGGCTGG CAACCGTCCA ATGGCGACCA GGGCAAGACC ACAGTGCGCT TCAACAACGT GACCTTCGCC GAGAACACCC CTGGGTCCAC ATTGTTCGGT AGCGGCTTCG ACATCCGCAA CAGCATCCTG TACTCCAAGA CCGAGCGCAC CTTCTGCAAC GATCAGAGCA ACACTGGCAA TAACCTGATC GAGTACTCCG CCGCGGGCGG CCTGTTCTAC AGCTGCCTCA CCGCCGGCCT GGTGCGCGCC ACCAATCCGC TGCTGGGCGC ACCAGCGGCC AACGGTGGGC CCACGCTCAC CCAATTGCCC GCGTCCAACA GCCCGGTGCT CAATCTCGGT AGCAACTGCC GCACGATCGA CCAGCGTGGC GTTGCACGCG ATACCGCTGT GTGCGATGCG GGCGCGGTGG AAATCAAGTA G
|
Protein sequence | MTAGLCALVT TSAAIAAVPS VAQCLTPQPW AHSNAGVVVG NGTAASCTAS ALATAVAQGG YVTFNCGASA VSIAVNQTIN ISASTPTVID GQGKITLDGG QVARIFQVQN GNALSVRNLK LQNGSSVQPA SNTQYAPGTW GGGAIKVSYR GKLEVINSQF LSNRSSIGGG AIFAGSDADV TIVKSSFSKN TSWLGGALYT QLSRLTIVNS EFVGNQAINA PAGFPDADQF GNSGAIDTDG ASLAGYLNAA AGGATLSVCG TVVRNNTAAN SGGGATLWAY APDTIDVRYS TFANNIAYGG PAGGARISLG FGDTTHSGTT ITTPGIINVE ETSFLSNRAE KSNAGALYMD CYGPSCNVSN STFYGNYAKG VGAAIQHVGW QPSNGDQGKT TVRFNNVTFA ENTPGSTLFG SGFDIRNSIL YSKTERTFCN DQSNTGNNLI EYSAAGGLFY SCLTAGLVRA TNPLLGAPAA NGGPTLTQLP ASNSPVLNLG SNCRTIDQRG VARDTAVCDA GAVEIK
|
| |