| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02546 |
|---|
| Symbol | |
|---|
| ID | 6307792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4397498 |
|---|
| End bp | 4397992 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642641526 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001915364 |
|---|
| Protein GI | 188578435 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA TCGCCACCTT CGACACCTCC CGCGGCCCGA TCGTTGTCGC GCTGTACCCG
GAGAAGGCCC CGCTGACGGT TGCCAACTTC GTCAATCTGG CCAAGCGCGG CTTCTACAAC
GGCCTGAGCT TCCACCGCGT CATTGCCGAC TTCATGATCC AGGGCGGTTG CCCCGAAGGT
TCCGGCCGCG GCGGCCCGGG CTACCGGTTC GAAGACGAGA CCAACAACGG CGTCGGCCAC
GAGCGCGGCG TGCTGTCCAT GGCCAACGCC GGCCCGAACA CCAACGGCAG CCAGTTCTTC
ATCACCCACA CCGCCACCCC GTGGCTGGAC GGCAAGCACA CCGTGTTCGG CAAGGTCATC
CAAGGCCTGG ACGTGGTCGA TAGCGTTGCC CAGGGCGACA CCATCAATAC GCTTACCATC
GAAGGCGATA CCGACGCCGT GCTGGCCGCC AAGGCCGACC GCGTCGCGGA GTGGAACAAG
ATCCTCGCCG CCTGA
|
|---|
| Protein sequence | MSLIATFDTS RGPIVVALYP EKAPLTVANF VNLAKRGFYN GLSFHRVIAD FMIQGGCPEG
SGRGGPGYRF EDETNNGVGH ERGVLSMANA GPNTNGSQFF ITHTATPWLD GKHTVFGKVI
QGLDVVDSVA QGDTINTLTI EGDTDAVLAA KADRVAEWNK ILAA
|
|---|
| |