Gene PXO_02539 details

Gene Information

• Locus tag: PXO_02539
• ID: 6307785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4390111
• End bp: 4390572
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642641520
• Product: cell Wall Hydrolase superfamily
• Protein accession: YP_001915358
• Protein GI: 188578429
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3773] Cell wall hydrolyses involved in spore germination

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTG TTTGGATACT CTGGCTGTCG CATGTGTTGC CGCAGCCAGC CGCAGATTCG 
CTGTGTTTGA GTACGACCGT TTATCTGGAA GCGCGCGACC AGACCTTGCG TGGCCAGCAG 
GCCGTTGCGG AAGTTGCGTT GCGTCGTCTC GATAGTGGTT TGTGGGGCGA TTCGATGTGT 
CAGGTGGTCA CTGCGCGCAA GCAGTTCGCA CCGACGATTG TGGCGCCGGG CACGCAGCTG 
AAAAACGACG ATGCCTGGAA CAAGGCCTTG GACGTGGCAC TGGCGGCGCA GCGCAACTGG 
GCACTTCCGG TTGGCCAGCG CAAAGAGATC GTACCGGGCG CCAGTCACTT TGCCGCAAGC 
GCAATTGCGA GCCCCAGCTG GCGTAATGCC TATCAGGTGG CCACCATCGG CGACCACACC 
TTCTATCGCG TGCAAACGCT ACGCCCGCGC AACACGTCCT GA 

 

Protein sequence

MKLVWILWLS HVLPQPAADS LCLSTTVYLE ARDQTLRGQQ AVAEVALRRL DSGLWGDSMC 
QVVTARKQFA PTIVAPGTQL KNDDAWNKAL DVALAAQRNW ALPVGQRKEI VPGASHFAAS 
AIASPSWRNA YQVATIGDHT FYRVQTLRPR NTS