| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02489 |
|---|
| Symbol | |
|---|
| ID | 6307737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4340138 |
|---|
| End bp | 4340533 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642641472 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_001915310 |
|---|
| Protein GI | 188578381 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGTT CCGACGAAGG CAGCGCCGAC CGCCTGCGCG AATTCACCGA ATTCCGTCAG
CGCATGAATC AGCGCATCCT GACCGAGCCG AACCAAGTGG TGCGGCGCTT CTTTGCGCTG
GACACCCAGA CCTATCAAGC CGGCACCCTG GACGTGAAGA CCAAGGAGCT GCTCGGCCTG
GTCGCCTCGA TGGTGCTGCG CTGCGACGAC TGCATCAGCT ATCACGTGGC CCAGTGCAAG
GAAGCCGGCG TGAGCCGCGA AGAGTTCTTC GAAACCTTTT CGGTCGGCCT GGTGGTCGGC
GGCTCCATCG TGATCCCGCA CTTGCGTCGC GCAGTGGATT TCCTCGACCA GCTCGAAAGC
GGCGCGCAGG CGCCGGCCCC GCACGCGCAC GACTGA
|
|---|
| Protein sequence | MSGSDEGSAD RLREFTEFRQ RMNQRILTEP NQVVRRFFAL DTQTYQAGTL DVKTKELLGL
VASMVLRCDD CISYHVAQCK EAGVSREEFF ETFSVGLVVG GSIVIPHLRR AVDFLDQLES
GAQAPAPHAH D
|
|---|
| |