Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02476 |
Symbol | clpX |
ID | 6307719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4329352 |
End bp | 4330638 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642641456 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001915299 |
Protein GI | 188578370 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAG ACCGCCAAGG TCGTTCCGGC GACAGCAACA AGATTCTTTA CTGCTCGTTC TGCGGTAAGA GTCAGCATGA AGTCCGTAAG CTGATTGCCG GTCCCAGCGT ATTCATCTGC GATGAGTGCG TTGAGCTGTG CAACGACATC ATCCGCGAGG AACTCGAAGA GAAGGCGCAG TCGGCACGCT CCAGCCTGCC CAAGCCGCGC GAGATCCTCG AGGTGCTGGA TCAATACGTG ATCGGGCAGT TGCGCGCCAA GCGCACGCTT GCGGTAGCGG TGTACAACCA CTACAAGCGT ATCGAGAGCC GCAGCAAGAA CGATGACGTC GAGCTGGCGA AATCCAACAT TCTGCTGGTC GGTCCGACCG GTTCGGGCAA GACGCTGCTG GCCGAAACGC TGGCCCGCTT GCTCAACGTG CCGTTCACGA TCGCCGATGC CACCACGCTG ACCGAAGCCG GCTATGTCGG CGAGGACGTG GAAAACATCA TCCAGAAGCT GCTGCAGAAG TGCGACTACG ACGTCGAAAA GGCGCAGCAG GGCATCGTCT ATATCGACGA AATCGACAAG ATCTCGCGCA AGAGCGAGAA CCCGTCGATC ACCCGCGACG TGTCCGGCGA AGGCGTGCAG CAAGCGCTGC TAAAGCTGAT CGAAGGCACG GTTGCTTCGG TGCCGCCGCA GGGTGGCCGT AAGCACCCGC AACAGGAATT CCTGCAGGTC GACACCAAGA ACATCCTGTT CATCTGCGGC GGCGCGTTCG CCGGCCTGGA TAAGGTGATT CAGCAGCGTT CCAACGATGC CGGTGGTATT GGCTTCGGTG TCAAGGTCAA GAGCAGCGAG CGCAAGCAGG AAGTGGGCAA GATCCTGGCC GAAGTCGAGC CGGAAGATCT GATCAAGTTC GGTCTGATTC CGGAATTTGT CGGTCGCCTG CCGGTGGTCG CCACGCTGGA AGAGCTGGAT GAGCCGGCGC TGATCAAGAT CCTGACCGAG CCCAAGAACG CCATCACCAA GCAGTTCAAG AAGCTGTTCG ATATGGAGGG TGTGGAACTG GAGTTCCGCG CCGACGCCCT GTCTGCGATC GCCAAGAAGG CGCTCAAGCG CAAGACCGGC GCGCGTGGCC TGCGCACCAT CGTCGAATCG GTGCTGCTGG ACACCATGTA CGAGCTGCCG TCGCAGGAAA ATGTCAGCAA GGTGGTGGTG GACGAGTCGG TGATCGAGCA CAAGTCCGAG CCTTATCTGA TCTACCAGGC GCAACCGGCA CCGGCAAAGG CTGCGTCCGG CGACTGA
|
Protein sequence | MSEDRQGRSG DSNKILYCSF CGKSQHEVRK LIAGPSVFIC DECVELCNDI IREELEEKAQ SARSSLPKPR EILEVLDQYV IGQLRAKRTL AVAVYNHYKR IESRSKNDDV ELAKSNILLV GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQQ GIVYIDEIDK ISRKSENPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV DTKNILFICG GAFAGLDKVI QQRSNDAGGI GFGVKVKSSE RKQEVGKILA EVEPEDLIKF GLIPEFVGRL PVVATLEELD EPALIKILTE PKNAITKQFK KLFDMEGVEL EFRADALSAI AKKALKRKTG ARGLRTIVES VLLDTMYELP SQENVSKVVV DESVIEHKSE PYLIYQAQPA PAKAASGD
|
| |