Gene PXO_02464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02464 
Symbol 
ID6307701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4312079 
End bp4314799 
Gene Length2721 bp 
Protein Length906 aa 
Translation table11 
GC content68% 
IMG OID642641438 
ProductRhs element Vgr protein 
Protein accessionYP_001915285 
Protein GI188578356 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGA TGCAGTACGT TGCGATCAGT CAAGACGGTC GCACTCTCGA ACTCCAGTTT 
GCCGGTCAGA ACGCTCCGCA TCCCAATCTG CTCTTTCCGC TGCGTCTGCA ACTAACCTGG
GCACTGAGCG AGCCGTTCAC CGCCGATGTC ACCTGCCTGA GCCAATCCTC GGCGATCGAA
CTCAAGACGC TGCTCGGCCA GCGCGCCGGC ATCACCATCC GGCACCACGA TGGTGAGCGC
AAGGTCAACG GCGTGGTGAC CGCCGTGCGG CAGCTGGGTG CCGATGGTGG CTTCTCCAGC
TACCGCTTGC GGATACAGCC CGCACTTGCC CTGCTGGCCT ACCGCCGTAC CTGCCGCATC
TTTCAGGACG TAAGCGTGCC GGACATCGTT GCGCAGATCG TGCAGGAGCA TCGCGCCAGC
AATCCCCCGA TCGCCGCCAG CTTCCGCCTG GACCAGCAAC TGCGCCAGAC CTACGCGCCG
CGCTCGTATT GCACGCAGTT CGACGAAGAC GACCTCGGCT TCATCCATCG CGTGCTGGCC
GAGGAAGGTA TCAACTACAC GTTTGTCTTC GCCGACGACC AGGGCGCCCC GACGCACACG
CTGGTGTTGT TCGACGACGT CAACGACTTG GCCCAGGCCA GCCCGGCCCG CATCGGCTAT
CGCCGTGCCG AAGACGCCAC GCCGGCCGAC AGCCTGCTGG CCTGGCAGGG CGAGCGGCAG
GTCATGACCT CTGCAACCGC CCTGGTGAGC TACGACTACA AGCCGGCCGC CTCCAGCAAC
GCGGACGATC GGTCCGTGAT CGACCAGGGC GAGGAAGGGC GCGCGGCCAG CGCCACGCTG
CGGGATTACA GCGCGCTGTC GCCCTACTAC GCCAGCGACA GTGCCGAATA CGCGCGCTAT
GCCCAGGTGC GCCAGACCTG GCACGACCAG CGGGCCAAGA CCTGGTATGG CGGTGCGACG
ACGCCTGGCC TGGAAGTCGG CACGTATGTC GAGATCGCCG ACCATCCATC GCTGGCCGAG
GACAGCAGCG AGCAGCGTCA GTTCGTGGTG ACCGAGCAGT TCCTGGACAT CACCAACAAC
CTGCCCGCGG ACATGACCCG CCAGCTGCCC AGCGGCCTGC TGGGGCTTCC CTCGGCAGAC
GTCAGCCCCC CACCATCGCT GGCCGCGGTC CCCCCGCCGC CCGCAGGGGC CGCGCAATAC
CTCCGCTTTG CCGGCGTGCG GCGCGGTGTG GCCTTGGTGC CGTCGCGCGT CCCATCGCTG
CGCCGGCCCA CCGCATCGGG GCCGCAGACC GCCACGGTGG TCGGCAAGGC CGGCGAAGTG
GTCGATACCG ACGAAATGGG GCGCATCCTG GTCCAGATGC ACTGGCCGCT GGCGCAGGAG
CACGCCAAGG GCGGCGCCGA CGACGACGAG CGCTCCAGCA CGCGCGTGCG CTATGCCTCC
CCCTCGGCCA GTGAGGGGTT CGGGCACCAG TTCATCCCGC GCGTGGGCGA TGAGGTGTTG
ATCGAGTTCC TGCACGGCGA TATCGACCGA CCGATCGCCG TGGCGGTCAT CCACAACGGT
CGCCGGCCCA CCGCCGCGTT CAGCGGCGCC ACGGGGCTGC CGGGCAATCG CGCGCTCTCG
GGCATCCTCA CGCGCGAGCA CAACGGCAGT GGCGCCAATG AACTGCTGTT CGACGACACC
ACCGGGCAAC CGCGTGCGCG CCTGGCCAGC ACCCACCAGG CCAGTGAGTT GAATCTCGGC
TACCTGACCC ACCCACGGGC AGATGGCCAA GCTGACTCGC GCGGCCAAGG CGCCGAACTG
CGCACCGACG CGGCAGCGGC CTTGCGCGCT GCCCAGGGCA TGTTGCTGAC CACCTACGCG
CGCAGCCAGG CCGCAGGCCA CCAACTCGAC CGCGACGAAC TCGACGCGCT GTTGGCGCAA
TGCCTCGAAC TGTTCAAGGG CCTGGGCGAC TATGCCGCCC AGCACGGCGG GCAAGCGGTG
GAGACCGGCG GGCAGGACGC ACTACGGCAG GCACTGCAGG GCTGGCCCAG CGGCACCGAG
CGCAGCGCCG CAGGCAAGCC GTTGATGGCC TTCGCCGCCA GCGAGGGCAT GGTCAGTGCC
ACCCCGCACA GCCATCTCAG CTACGCCGGC CAGAACATCG ACAGCGTGGC GCAGCAACAC
CTGCAGCTGA CCAGCGGCCA GGCCACACGC GTGCATGCAG GGCAAGGGAT CGCGCTGTTC
GCGCAAGCGT CCGGCCTGAG CGCCATTGCC AACCAGGGTC CCGTGCACTT GCAGGCACAG
GCCGATGCCC TGGTGGCCAA CGCGCAGACC AACCTGCAAC TGACCGCCAA CACCGGCGAG
GTGTTGCTCA GCGCGCCACG GATCCGGCTG GTGGCCGAGG ACGGCAGTTT CCTGAGTATT
GGCGGCGGCA TCACGCTTGG CACCCAGGGC GGGGTCGAGC TGCACGCGGC CAGCCATGCA
TTGCTGGGAC CGTCCACCGA GCAGGCCGAC CGCCCCAGCT TCGGCAAGGA CGGCACCGAC
CAGAAATTCC AGCTGCACTA CCCCAGCCAC AGCGCGGACA CGCCCCAGCT TGCGGCCAAC
CAGCCCTATA GCATCACCCT GGACGACGGC CGCGTCGTGC AAGGCGTTTC CGATGCCAAC
GGCCTGACCG ATCTGCTGCG CGATGAGGTC ACGCGCATTG CGCGCATCGA GGTCCACAAG
TCACCGGCCA GCGGCGGCTG A
 
Protein sequence
MDLMQYVAIS QDGRTLELQF AGQNAPHPNL LFPLRLQLTW ALSEPFTADV TCLSQSSAIE 
LKTLLGQRAG ITIRHHDGER KVNGVVTAVR QLGADGGFSS YRLRIQPALA LLAYRRTCRI
FQDVSVPDIV AQIVQEHRAS NPPIAASFRL DQQLRQTYAP RSYCTQFDED DLGFIHRVLA
EEGINYTFVF ADDQGAPTHT LVLFDDVNDL AQASPARIGY RRAEDATPAD SLLAWQGERQ
VMTSATALVS YDYKPAASSN ADDRSVIDQG EEGRAASATL RDYSALSPYY ASDSAEYARY
AQVRQTWHDQ RAKTWYGGAT TPGLEVGTYV EIADHPSLAE DSSEQRQFVV TEQFLDITNN
LPADMTRQLP SGLLGLPSAD VSPPPSLAAV PPPPAGAAQY LRFAGVRRGV ALVPSRVPSL
RRPTASGPQT ATVVGKAGEV VDTDEMGRIL VQMHWPLAQE HAKGGADDDE RSSTRVRYAS
PSASEGFGHQ FIPRVGDEVL IEFLHGDIDR PIAVAVIHNG RRPTAAFSGA TGLPGNRALS
GILTREHNGS GANELLFDDT TGQPRARLAS THQASELNLG YLTHPRADGQ ADSRGQGAEL
RTDAAAALRA AQGMLLTTYA RSQAAGHQLD RDELDALLAQ CLELFKGLGD YAAQHGGQAV
ETGGQDALRQ ALQGWPSGTE RSAAGKPLMA FAASEGMVSA TPHSHLSYAG QNIDSVAQQH
LQLTSGQATR VHAGQGIALF AQASGLSAIA NQGPVHLQAQ ADALVANAQT NLQLTANTGE
VLLSAPRIRL VAEDGSFLSI GGGITLGTQG GVELHAASHA LLGPSTEQAD RPSFGKDGTD
QKFQLHYPSH SADTPQLAAN QPYSITLDDG RVVQGVSDAN GLTDLLRDEV TRIARIEVHK
SPASGG