Gene PXO_02454 details

Gene Information

• Locus tag: PXO_02454
• ID: 6307691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 4301257
• End bp: 4301943
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642641428
• Product: integrase
• Protein accession: YP_001915275
• Protein GI: 188578346

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCCAAC GTATCGAGAC GATCCTTGAT GCCGCCACGG TGAAGCGGAA GCGGACTGGC 
GACAACCCGG CGCGCTGGAA GGGCCATCTG TCGATGATCC TCCCCAAGCC CAAGACGGTC 
GCTCCGGTCC AGAACTTCCC GGCACTCCCT TACAAGGACA TCCCCGAGTT CATGGCCGCA 
TTGCGCAAGC GACACGGCGA GGCAGCGCGC GCTCTGGAGT TCACGATCCT GACTGCCGCC 
CGCACCGGAA TGACCCTGGG AGCGGTCCCG GCCGAGTTCA CCGGCAACGA CTGGACTTGT 
CCAGCTGAAC GAATGAAATC CAAGAAGGAA CACGTCGTTC CGCTCTCGAC AGCGGCCCAG 
GCAATCGTCA AGCCCAGGCT TTCGCGGAAG CTTTTGTTCC CGAATGACGT CTCTGGCGAA 
CCGCTATCGG AGAATGCAAT GCTCGCATTG CTCAAACGCA TGGACCGCGG CGACATCACC 
GTTCACGGCT TTCGATCGAC CTTCAAGGAT TGGGCAAGCG AGGTCACCGA CTTCCCCGAT 
GACCTGTCCG AGGCAGCGCT AGCGCATGAG ATAACGGACA AGGCCAAAGC CGCTTACAAG 
CGCGGCAAGA TGTTGGAGAA GCGACGCAAG ATGATGGAAG CATGGGCCAA CTACTGCGCA 
TCCCCGCCGG CGCACCCTAT CTCATGA 

 

Protein sequence

MRQRIETILD AATVKRKRTG DNPARWKGHL SMILPKPKTV APVQNFPALP YKDIPEFMAA 
LRKRHGEAAR ALEFTILTAA RTGMTLGAVP AEFTGNDWTC PAERMKSKKE HVVPLSTAAQ 
AIVKPRLSRK LLFPNDVSGE PLSENAMLAL LKRMDRGDIT VHGFRSTFKD WASEVTDFPD 
DLSEAALAHE ITDKAKAAYK RGKMLEKRRK MMEAWANYCA SPPAHPIS