| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02433 |
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| Symbol | def |
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| ID | 6307668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4282772 |
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| End bp | 4283287 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642641405 |
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| Product | peptide deformylase |
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| Protein accession | YP_001915253 |
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| Protein GI | 188578324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.562042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCGCG ACATTATCCG CATGGGCGAC AAGCGCTTGC TGCGTGTGGC GCCACAGGTC
ACCAACCTGG GCAGCGCCGA GTTGCACGCG CTGGTGTCCG ACATGTTCGA AACCATGGGC
GCTGCGCATG GCGTCGGTTT GGCAGCGCCG CAGATCGCGG TGGATCTGCA ATTGATGGTG
TTCGGTTTCG AAGCCAGCGA GCGCTATCCC GAAGCACCCG CAGTACCGCT CACGGCTCTG
GCCAACGCAC AGATCGAACC GCTATCGGAC GAGATGGAAA ACGGCTGGGA AGGCTGCCTG
TCGATTCCCG GTCTGCGTGC AGTGATTCCA CGTTATCGCT ACATTCGTTA CCGCGGCTTT
GCGCCCGACG GCAGCCCGAT CGAGCGCGAG GCCGAAGGCT TCCATGCACG CGTGGTGCAA
CACGAATACG ATCACTTGGT CGGTCGTCTG TATCCCTCGC GCATCGAAAA CTTTGACACC
TTCGGTTTCG ACGACGTCTT GTCTTACGAT CTGTAG
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| Protein sequence | MIRDIIRMGD KRLLRVAPQV TNLGSAELHA LVSDMFETMG AAHGVGLAAP QIAVDLQLMV
FGFEASERYP EAPAVPLTAL ANAQIEPLSD EMENGWEGCL SIPGLRAVIP RYRYIRYRGF
APDGSPIERE AEGFHARVVQ HEYDHLVGRL YPSRIENFDT FGFDDVLSYD L
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