| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02354 |
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| Symbol | |
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| ID | 6307592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4201822 |
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| End bp | 4202580 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642641330 |
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| Product | fimbrial assembly membrane protein |
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| Protein accession | YP_001915178 |
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| Protein GI | 188578249 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.699012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAA TCAATCTATT GCCCTGGCGC GCGGAGCGCC GAAAGGCACG CGAGCGCGAG
TTCTATTCGA TGCTGGGCTT CGCCGCATTG GGCGGGCTGC TGTTGTCGGC GCTGATCTGG
TTCTATTACG ACGCGCAGAT CAGCGGCCAG ACCGAGCGCA ACGCGTTTTT GACCACCGAG
ATCGACAAGG TCAAGGCGCA GAACGAAGAG ATCAAGGAGC TCGACAAGAA GAAAGACCGC
CTGCTTGCCC GCAAGAAGGT GATCGAGGAA TTGCAGGCCA ACCGCTCGCA GATGGTGCAC
CTGTTCGATT CGCTGGTGCG CACCATCCCC GATGGCGTGG CGCTGACCAA CATCAAGCAG
GATGGCGACA TTCTCACGCT GGAAGGTCGC TCGCAATCGA ATGCGCGGGT CAGCGCGTAC
ATGCGCAAGC TGGAAAGCTC GGGCTGGATG ACTAATCCAG ACCTGTCGAT CATCGAGGCT
AAGATCCAGG ACAAGGCTGG GCAACCTGGC GCGTCGTCGA TGGACACCAA GACGCTGCCG
TACGTGTTCA CGCTCAAGGT CAAGCTGGCC AATCCGAACG AGGCTGACAA AAACGGCATC
GCGCCGGGCA CCGCAGCACC GGGTGCAGCG CCTGCCGGCG CGATGCCTGC TGCTCCGGCA
GCGGCACCTG CGCCCGCACC GCCGCCGGCC GCTGCTCCTG CACCGACGCA GGCAGCACCG
GCGCCAGCCA ATCGGCCGCA GCAGGGGGCG TCATCATGA
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| Protein sequence | MARINLLPWR AERRKARERE FYSMLGFAAL GGLLLSALIW FYYDAQISGQ TERNAFLTTE
IDKVKAQNEE IKELDKKKDR LLARKKVIEE LQANRSQMVH LFDSLVRTIP DGVALTNIKQ
DGDILTLEGR SQSNARVSAY MRKLESSGWM TNPDLSIIEA KIQDKAGQPG ASSMDTKTLP
YVFTLKVKLA NPNEADKNGI APGTAAPGAA PAGAMPAAPA AAPAPAPPPA AAPAPTQAAP
APANRPQQGA SS
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