Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02352 |
Symbol | |
ID | 6307590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4200630 |
End bp | 4201121 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641328 |
Product | fimbrial assembly protein |
Protein accession | YP_001915176 |
Protein GI | 188578247 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.688013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAC TGCCGGCGTG CACGCGCGGT GTGACCAGCA CACCGGGCGA CGCGCCGAAT CTGGAAGCCT GGGTTGCCGA GGTGCGCGCG CGTCCTGCGC CGCCGCTGGA ACCATTGCCT GTGATGCAGC AATTCGAGAC GTTCGAATAT GCCGCGCAGG CGATGCGCGA CCCGTTCAGC GATGCCTGGG TCAGCGCGGA AGGTGGCAAC GGCACGCGTC CGGATCCGAA CCGGCGCAAG GAACCGTTGG AAGCCTTTCC GCTCGACGCC CTCGACATGG TGGGGACCAT TGGCGGCGGT TCGGGCCTGA TCGCTCTGGT GATGGCGCCT GACAAGGTGA CCTACCGGGT GCGGCCGGGT GTGTATCTGG GACAGAGCGA TGGCCGGGTG ACCGGGGTCT ACGAAGACCG CATCGAGCTG ATTGAACTTG TGCCGGACGG TGCGGGTGGA TGGCTTGAAC GGCCGGCCGC ACTCGCATTG GGTGATCAAT AA
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Protein sequence | MAVLPACTRG VTSTPGDAPN LEAWVAEVRA RPAPPLEPLP VMQQFETFEY AAQAMRDPFS DAWVSAEGGN GTRPDPNRRK EPLEAFPLDA LDMVGTIGGG SGLIALVMAP DKVTYRVRPG VYLGQSDGRV TGVYEDRIEL IELVPDGAGG WLERPAALAL GDQ
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