Gene PXO_02352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_02352 
Symbol 
ID6307590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4200630 
End bp4201121 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID642641328 
Productfimbrial assembly protein 
Protein accessionYP_001915176 
Protein GI188578247 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.688013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAC TGCCGGCGTG CACGCGCGGT GTGACCAGCA CACCGGGCGA CGCGCCGAAT 
CTGGAAGCCT GGGTTGCCGA GGTGCGCGCG CGTCCTGCGC CGCCGCTGGA ACCATTGCCT
GTGATGCAGC AATTCGAGAC GTTCGAATAT GCCGCGCAGG CGATGCGCGA CCCGTTCAGC
GATGCCTGGG TCAGCGCGGA AGGTGGCAAC GGCACGCGTC CGGATCCGAA CCGGCGCAAG
GAACCGTTGG AAGCCTTTCC GCTCGACGCC CTCGACATGG TGGGGACCAT TGGCGGCGGT
TCGGGCCTGA TCGCTCTGGT GATGGCGCCT GACAAGGTGA CCTACCGGGT GCGGCCGGGT
GTGTATCTGG GACAGAGCGA TGGCCGGGTG ACCGGGGTCT ACGAAGACCG CATCGAGCTG
ATTGAACTTG TGCCGGACGG TGCGGGTGGA TGGCTTGAAC GGCCGGCCGC ACTCGCATTG
GGTGATCAAT AA
 
Protein sequence
MAVLPACTRG VTSTPGDAPN LEAWVAEVRA RPAPPLEPLP VMQQFETFEY AAQAMRDPFS 
DAWVSAEGGN GTRPDPNRRK EPLEAFPLDA LDMVGTIGGG SGLIALVMAP DKVTYRVRPG
VYLGQSDGRV TGVYEDRIEL IELVPDGAGG WLERPAALAL GDQ