| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02351 |
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| Symbol | |
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| ID | 6307589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4198661 |
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| End bp | 4200628 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642641327 |
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| Product | fimbrial assembly protein |
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| Protein accession | YP_001915175 |
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| Protein GI | 188578246 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.733093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGGGG ATAGCACGAT GACGTTTTCC AATGCCCAGC GGCTGCGTCC GGTACGACGC
CACGCGATCT TCCAGGCCTG CGCGTTGGGG TTCGCGCTGG CACTGGCGAG CGGCAGCGCA
TTCGCCGCAG CGGCGCTGAC TCAGCCCGCG CAGGATCCGG CCAAGGTCGC TCCGGCGAGC
CTGGCGGTGT CCAAAATCGA TTTCAAACGC GGCGAAGACG GCACTGGCCG TCTGATCCTG
CAGTTCAACG GCCAGGGGGC CAGCCCGGAC CTGCGGACAC AGGGCGACAA CGTGCTGGTG
GACATCAGCA ACGCCAGGTT GCCGGCCGAG CTGCAACGCC CGCTCAACGT CACCGACTTC
GCAACGCCGG TGCAGCGTGT GGAAGTGAAG CCGTCGGGCT CCGGTTCGCA GTTGGTGCTG
TCGACCAAGG GCGCCTTCGA TTCGCTGGCC TACCAGACCG GAAACGAATA CGTGGTCGAA
ATCACCCCAC GCAAGGGCCA GCCGGCGGTT GGCGGTGTGA GCCCGGCCGC AGTCACCCAG
GCTGCCGCGC AGATCGCCGC GCGCGGCTAC AGCGGTCGCC CGGTGACGTT CAACTTCCAG
GACGTGCCGG TACGCACCGT GCTGCAGCTG ATCGCCGAGG AGTCCAATCT CAACATCGTT
GCCTCCGACA CCGTGCAGGG CAATGTCACA TTGCGCCTGA TGAACGTGCC GTGGGACCAG
GCGCTGGACA TCGTCCTGCG TGCCAAGGGC CTGGACAAGC GCCGCGACGG TGGCGTGGTG
TGGGTCGCCC CGCAGCCGGA GTTGGCCAAG TTCGAGCAGG ACAAGGAAGA CGCCCGCATC
GCGATCGAGA ATCGCGAGGA TTTGATCACC GATTACGTGC AGATCAATTA CCACAATGCG
GCGGTGATCT TTAAGGCGCT GACCGAGGCT AAGGGAATTG GCGGTGGTGG TGGTAGTGGC
GGTGGCCAGG GCGGACAAGG TGGTGCCGGG CAGCAGGACA ATGGCTTCCT GTCGCCGCGC
GGCCGTTTGG TTGCCGATGA ACGCACAAAT ACCTTGATGA TCAGCGATAT TCCGAAAAAG
GTCGCGCAGA TGCGTGAACT GATTTCGCAT ATCGATCGCC CGGTGGATCA GGTGCTGATT
GAGAGCCGGA TCGTCATTGC GACTGATACC TTTGCGCGCG ATCTGGGCGC CCGCTTTGGC
ATTATCGGCG CGACAGGTCG CGGCATTCTC AGTGGTTCGC TCGATAGCAA CACCAACTAT
CTGAACACTT CGGCGAAGCG GGCCAGCGAG ATCGCCAATG GAGGCACCAG CACCACGCTG
CCTGCGCATC TGTTCCCGTC CGGACTGAAT GTCAATCTCG GTGCAGGCGG TGGATTCACC
ACCAACACGC CTGGCGGCCT CGCCTACACC TTGCTGGGTT CCAATTTCAA TCTGGATATC
GAGTTGTCGG CGATGCAGCA AGAGGGACGT GGCGAAGTCG TATCGAACCC GCGCATCGTT
ACCGCGAATC AGCGCGAGGG CGTGATCAAG CAGGGCCGGG AGATCGGCTA TGTGACCATC
AGCGGCAGTG GTGCGGGCGG CGGTTCGCAG GCCAACGTGC AGTTCAAGGA AGTGCTGCTT
GAACTCAAGG TGACGCCAAC CATCACCAAT GACAATCGGG TCTTTCTTAA CATGAATGTC
AAGAAGGACG AGGTTGCACG GCTCATCGAT TTGCCATTGT ATGGAACGGT GCCGGAGATC
AATCGTCGGG AGATCAATAC CGCCGTGCTG GTCGGAGATG GTGAAACCGT GGTGATCGGT
GGTGTCTACG AATTCACCGA TCGCGAGAGC GTCTCCAAGG TGCCGTTCCT GGGCGACATC
CCGTTCCTGG GCAACTTGTT CAAAAAGCGT GGTCGTAGCA AGGAAAAGGC TGAGCTCCTT
GTATTTGTCA CGCCCAAGGT GCTCCGTGTG GCTAGCGCAA CCCGCTAA
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| Protein sequence | MIGDSTMTFS NAQRLRPVRR HAIFQACALG FALALASGSA FAAAALTQPA QDPAKVAPAS
LAVSKIDFKR GEDGTGRLIL QFNGQGASPD LRTQGDNVLV DISNARLPAE LQRPLNVTDF
ATPVQRVEVK PSGSGSQLVL STKGAFDSLA YQTGNEYVVE ITPRKGQPAV GGVSPAAVTQ
AAAQIAARGY SGRPVTFNFQ DVPVRTVLQL IAEESNLNIV ASDTVQGNVT LRLMNVPWDQ
ALDIVLRAKG LDKRRDGGVV WVAPQPELAK FEQDKEDARI AIENREDLIT DYVQINYHNA
AVIFKALTEA KGIGGGGGSG GGQGGQGGAG QQDNGFLSPR GRLVADERTN TLMISDIPKK
VAQMRELISH IDRPVDQVLI ESRIVIATDT FARDLGARFG IIGATGRGIL SGSLDSNTNY
LNTSAKRASE IANGGTSTTL PAHLFPSGLN VNLGAGGGFT TNTPGGLAYT LLGSNFNLDI
ELSAMQQEGR GEVVSNPRIV TANQREGVIK QGREIGYVTI SGSGAGGGSQ ANVQFKEVLL
ELKVTPTITN DNRVFLNMNV KKDEVARLID LPLYGTVPEI NRREINTAVL VGDGETVVIG
GVYEFTDRES VSKVPFLGDI PFLGNLFKKR GRSKEKAELL VFVTPKVLRV ASATR
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