Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02342 |
Symbol | |
ID | 6307580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4187741 |
End bp | 4188970 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642641318 |
Product | proton glutamate symport protein |
Protein accession | YP_001915166 |
Protein GI | 188578237 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGATTG GCTTCGCCGT TGGCCTGTTG TTGGGTCTGG CTGTCTATTA CCTGGCCGGC AGCGATGCCG ATTGGGTACG TCTGCTGACC AAGTACGTCA CCACGCCGTT TTCGCAGATC TTCCTCAATC TGATCTTCAT GCTGATCGTA CCCTTGCTCT TTTCGGCGCT GGTCATGGGC ATCTCTGAAA TGGGCGACAT CCGCGCGCTG GGACGGTTGG GGTGGCGCAC CCTTGGCTAT ACCGTGGTGC TTTCCGGTGT GGCGGTGTTG CTGGGGTTGG TGCTGGTCAA CGTGCTCAAG CCCGGCGCGG GCGTGGACCC GCAAGTGGCC AATCAGCTGA TCCAGGAAAA CGCCGAGCGC ACCCGCGAGA TCATCTCCAG CTCCGGCACC CAGCCGCAGG GCATGGGCAT GCTGCTGTCC ATCGTGCCCA GCAACGTGAT TGCGGCAGCG TCCAGCAATG GCGCGATCTT GTCGCTGATG TTTTTTGCGG TGATGTTCGG CGTGGGCATG GTGCTGACTG CCGATGAAAA GGTCGCCACG CTGCGGCGTG GGATCGAAGG CGTCTTCGAG ATTTCGATGA CCCTGATCGG GCTGGTGATC CGCCTGGCGC CGTATGCGGT GGCCTGCTTC ATGTTCAACC TGGCGGCATT GTTCGGCTTC GATCTGTTGA TTCGCCTGGG CGCTTATGTG GGCGTGGTGG TGCTGGCGCT GGGCCTGCAG ATGGTGGTCA GTTACGGGGT CGCGGTGAAG TTCGCCGGGC GCTCGCCGCT GGTTTTTTTC CGCCAGACCC AGGAAGCGAC GGTGATGGCG TTCTCGACCG CCTCCAGCAA CGCCACCCTG CCGACCGCCC TGCGCGTGGC CGACGAGATG GGCCTGCCGC CGCGCGTGTC GCGTTTCGTG CTGACCGTGG GCGCCACTGC CAACCAGAAC GGCACTGCGC TGTTCGAAGG CGTGACGGTG ATCTTCCTGG CGCAGTTCTT CAACGTGGAT CTGAGCCTGG GACAGCAGTT CATGGTGATG CTGGTCTGTA TCCTGGGCGG GATCGGCACG GCCGGCGTCC CGTCCGGCTC GCTGCCGGTG GTGGCGCTGA TCTGTGCGAT GGTCGGGGTG AACCCGGTCG GCATCGGCAT GATCCTGGGC GTGAATCACT TCCTGGATAT GTGCCGCACG GCGCTGAACG TGACCGGGGA TCTGGCGCTG ACGACCTTGG TGGCCAAGGG TGAGGAATAG
|
Protein sequence | MGIGFAVGLL LGLAVYYLAG SDADWVRLLT KYVTTPFSQI FLNLIFMLIV PLLFSALVMG ISEMGDIRAL GRLGWRTLGY TVVLSGVAVL LGLVLVNVLK PGAGVDPQVA NQLIQENAER TREIISSSGT QPQGMGMLLS IVPSNVIAAA SSNGAILSLM FFAVMFGVGM VLTADEKVAT LRRGIEGVFE ISMTLIGLVI RLAPYAVACF MFNLAALFGF DLLIRLGAYV GVVVLALGLQ MVVSYGVAVK FAGRSPLVFF RQTQEATVMA FSTASSNATL PTALRVADEM GLPPRVSRFV LTVGATANQN GTALFEGVTV IFLAQFFNVD LSLGQQFMVM LVCILGGIGT AGVPSGSLPV VALICAMVGV NPVGIGMILG VNHFLDMCRT ALNVTGDLAL TTLVAKGEE
|
| |