| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02341 |
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| Symbol | tkt |
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| ID | 6307579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4185514 |
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| End bp | 4187514 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642641317 |
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| Product | transketolase |
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| Protein accession | YP_001915165 |
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| Protein GI | 188578236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.904862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC CCACCCGTCG CCAGCTGGCC AACGCCATCC GTTTTCTTGC CGCAGATGCG
GTCGAAGCCG CCAAGTCCGG TCATCCCGGC ATGCCGATGG GCATGGCCGA CATCGCCGAA
GTGCTGTGGA ACGATTTCTT CCGGCACAAC CCCAACAATC CGCAGTGGTT CAACCGCGAC
CGTTTCGTGC TCTCCAACGG CCACGGTTCG ATGCTGCAGT ACGCGCTGTT GCACCTGTCC
GGTTACGACC TGCCGATCGA GCAGCTCAAG CAATTCCGTC AGCTGCACAG CAAGACCCCC
GGTCACCCCG AGCGCAGCGA AACCCCCGGA GTGGAGACCA CCACCGGTCC GCTCGGGCAG
GGGTTTGCAA ACGCGGTGGG TTTTGCGCTG GCCGAGAAAT TGCTGGCGCA GCGCTACAAC
CGGCCTGAGC TGGAAATCGT CGATCACCGC ACCTGGGTGT TCATGGGCGA CGGCTGCCTG
ATGGAAGGCA TTTCGCACGA AGCCGCCTCG TTGGCCGGCA CCTGGGGCCT GGGCAAGCTG
GTGGCCTTCT GGGACAACAA CCAGATTTCC ATCGACGGCA ATACGGCCGG CTGGTTCAGC
GACGACACCC CGGCGCGTTT CCAGGCCTAT GGCTGGCATG TGATCCGTGA CGTGGACGGG
CACGACGCCG ACAAGATCAA GGCCGCCATC GAGACCGCGC TGGAGAACAC CGACAAGCCC
ACGCTGATCT GCTGCCGCAC CAAGATCGGC TTCGGTGCGC CGACCAAGGC CGGCAAGGAA
TCCTCGCACG GCGCGCCGCT GGGCAAGGAC GAACTGGAAG GCGCGCGCAA GGCACTGGAA
TGGCCGTACG GCCCGTTCGA AATTCCCGAA GAGATCTACG CCGGCTGGCG TGCCGGCGGC
ACTGGCACTT TGCGTCAGGC CGAATGGGAG CAGCTGTTCG ACAAGTACAG CAAGCAGTAC
GCCAGTGAAG CCGATGAGCT GACCCGTCGC TCGCACGGCG AGTTGCCGGC CGACTTCATC
GCCAAGGCCG ATGCCTACAT CGCCAAGGCG CAGGAAGAGG GCCAGACCAT CGCCTCGCGC
AAGGCCTCGC AGCTGGCCAT CGAAGCCTTC GCGCCGCTGC TGCCCGAGTT GATCGGCGGC
TCGGCCGACC TGGCGCACTC CAATCTGACC CTGTGGAAGG CCAGCAAGTC GGTGGCGACG
GACGACCCGG ACGCCAACTA CGTGTATTAC GGTGTGCGCG AGTTCGGCAT GACCGCCATT
GCCAATGGCC TGGCGCTGCA TGGCGGTTTC ATCCCGTTCG ACGCCACCTT CCTGGTGTTC
AGCGATTACG CCCGCAATGG CGTGCGTATG AGCGCACTGA ATCCGTCGCA TGCCATCCAT
GTGTACACGC ATGACTCGAT CGGCCTGGGC GAAGACGGCC CGACCCATCA ACCGGTGGAG
CACCTGGCCT CGCTGCGCTA CATCCCCAAC AACGATGTGT GGCGCCCGGG CGATGCGGTG
GAATCGGCAG TGAGCTGGAA GGCGGCCATT ACCCGCAAGG GCGGCCCGAC CTGCCTGATC
TTCAGCCGCC AGAACCTGCA GCACCAGCCG CGCAGCGCCG AACAGATCAA GTTGATCGAA
CGCGGTGGCT ACGTGCTGGC CGATGCCGAA GGTGGCACGC CGGACGTGAT CCTGATCGCC
ACCGGCTCGG AGGTTGGTCT GGCAGTGGAA GCCAAGAAGA CGCTGGATAC GGCTGGCCTG
AAGACACGCG TGGTGTCGAT GCCGTCGACC GATGTGTTCG ATCGTCAGGA CGCCGCGTAC
CGTGAGTCGG TGCTGCCGAA CGCCGTGCGC AAGCGCGTGG CGGTGGAAGC GGGCGTGACC
GGCTTCTGGC GCAAGTATGT GGGCCTGGAT GGCGATGTGG TCGGCATCGA CACCTTCGGC
GCCTCGGCAC CGGCGGATCA GCTGTATGCG TATTTCAAGA TCACGGCCGA GCATGTGGTT
GCGGCAGCCA AGGCGCTGTA A
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| Protein sequence | MTQPTRRQLA NAIRFLAADA VEAAKSGHPG MPMGMADIAE VLWNDFFRHN PNNPQWFNRD
RFVLSNGHGS MLQYALLHLS GYDLPIEQLK QFRQLHSKTP GHPERSETPG VETTTGPLGQ
GFANAVGFAL AEKLLAQRYN RPELEIVDHR TWVFMGDGCL MEGISHEAAS LAGTWGLGKL
VAFWDNNQIS IDGNTAGWFS DDTPARFQAY GWHVIRDVDG HDADKIKAAI ETALENTDKP
TLICCRTKIG FGAPTKAGKE SSHGAPLGKD ELEGARKALE WPYGPFEIPE EIYAGWRAGG
TGTLRQAEWE QLFDKYSKQY ASEADELTRR SHGELPADFI AKADAYIAKA QEEGQTIASR
KASQLAIEAF APLLPELIGG SADLAHSNLT LWKASKSVAT DDPDANYVYY GVREFGMTAI
ANGLALHGGF IPFDATFLVF SDYARNGVRM SALNPSHAIH VYTHDSIGLG EDGPTHQPVE
HLASLRYIPN NDVWRPGDAV ESAVSWKAAI TRKGGPTCLI FSRQNLQHQP RSAEQIKLIE
RGGYVLADAE GGTPDVILIA TGSEVGLAVE AKKTLDTAGL KTRVVSMPST DVFDRQDAAY
RESVLPNAVR KRVAVEAGVT GFWRKYVGLD GDVVGIDTFG ASAPADQLYA YFKITAEHVV
AAAKAL
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