| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02336 |
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| Symbol | |
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| ID | 6307574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4179995 |
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| End bp | 4182664 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642641312 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001915160 |
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| Protein GI | 188578231 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0825116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCTTT CCACACCCTC ATTGGCGTGC GCTGCCGAGA TGACCGCCAC CACCTTGGAT
TCGGTCAACG TACAAGCCAC CCACGCCGCA GCGCCGGGCT CGCTCAACGA ACAGCGTCTG
TCCAATAGCG TCAACAGCGT GATGAGCAAG CAGCAAATCG ACGCGATTCC ATCCGGCGGC
ATCGCCAATG TGGTGGCGCA TATGCCGGGA TTATCGGCCT ACAGCGACAT GCATCTTGGC
CAGGCCACCA CCGGCGAGAA CGCTTACGTC AGCATCCGCG GCATGGACGC CAGCTATAAC
GCGTACACGC TCAACGGCTT CGGCATGCCG GAAACCGACT CGTCGACACG CGCCATTTCG
TTGAACATGC TTGCGCCGTT CGGCATCCAG TCGGTGCAGG TGTCCAAATC GCCAACGCCC
GACATGCCCG GCGATTCGAT CGGCGGTGCG ATCAATATGC GCACCCCCAA TGCGTTCGAT
TTCGCCCAAG ACGTCTATGC CAAGAGCACG GCGCAAGGTC AGTTCAACGC ATTGGCCCAC
CATCTGGGTG GCAAGGACAG CGGCGGCACC TTCCAGCAAG AGCTGGCCTG GAAATTTGGG
CAAGGCGATG CCTTCGGCAT CTACGCATCG GCCTATTACG GCAAGAACAA CAACATGGCG
CAGGCACCGG CGCCCAACAG CAAATACGTG CCGGCAGACC CCACGCTCGC CCAGGCCACC
GACCTGCGCG ATGTCGGCCC CTTGATCAGC ACCCGCTACA AGTACAGCCT CTACACCAGC
CAGATCGAGC GCTATGGCGG CACTCTGTCG CTGGATTGGC AAGGCGACAC CAGCGCGCTG
TATGCGCGCG CCATCTACGG CAGTTATGGC GTCACAGGCA CGCAGGACCA GTCCAGTGCG
CGCCTGGAAA CTTATCGCAA ACAACCCACC GCGGTGCGCG GTGGATACTT CAATACGCAC
GATATCGACG AAACGCTGGC CACCTTGCAA CTGGGCGGGG AGACCACGCT TGATCGGTTG
CGTTTCGATT ACGGCAGCTC ATTCGGGCGC GGCACCCGCA GCCGGCCGGA TTATGTATCC
GCCAGCCTGT ATGGATTTAC CCCGGGCAGT TTCGCCTTCG ACCTCAGCGA CCCCACCTAC
CCGAGCATCG GCCCGAGTTC GCCGGCGTTG AAGGACTTTT TCTACAACCT GGATTCGTCG
CTATTGTGGA AGGTGCAGGG TCACGATGCC GGCAGCCACG ACAACCGCTT CAACGCGCAT
ACCGATATCG CTTATCAAGT CGATGGCGCC GTGCTGAATA GCGTCAAGCT CGGGCTGTCG
GCCGATCACT CGGAGCGCGA AGCCTACGAC CATCCGTTCT TCCACAAGGA TGGCAATTTC
GTCACCAATG GTCCGTACTT TGGCGGTCCG AATTACGCAT TCCCCACTGC CGGCGGCCCG
CCGCTGAGCG CGATCCCAGG CCGCATCACC GACAACGCAT TCGATGGCCA CTACGCCGGG
CCGTTCAAAC TGCTGGATCG CGGCTGGATG CGCGCGCAGG CGCTGCCGTA CAAATATATT
GACGATCCGA ACGGCGCAGG CAGTTACACC GCCAACGACT ACAACGCCAA CACCACCTCC
AGCAACGAGG CGATCTATTC GGGCTATGCG ATGGCCGCGC TGCACATCGG TGCCGTGAGC
GTGCTGCCTG GCGTGCGCTA CGAATTGACC CGGTATGCGG CCGATTCCTG GCAATCCAGT
GGCGATGGCC GCAACGGCAG TTTCGTCGAC ACCGGCAGCA CCTATGGCAA GGTCTTGCCG
GGCATCAGCA TCAACTATCG GCCGGACGAT CTCACCGTAT ATCGCGCCGC ATTGCGGCGC
AGTTTCAGCC GCCCGGCGTT TGGGTTGATT TCCGGCGAAA CGGTGTATTC GATCGACGAC
ACACAAAAGG TGGTCGGCAT TTCCAAGCCC AATCCCAACC TGCAGGCGAG CACCGCCGAC
AACGCCGACC TGTCTGCCGA GTTCTACGAC CACAACGGCG GCGTGCTCAG CGCCTCGACG
TACTACAAGC GCATCAACGG CTTCATCTAC ACCTCGCAAT CGGCCACCAG CAACGACAGC
ACCCTGGGCG GGCTGGTGCC AACCGGCACC ACGTTCGAAA ACGGTGTGCC GGTGACCATG
CCGCAGAATG GCGGCACCGC AAAGCTCTAT GGGCTGGAGT TGGCAGCGAG CAAACGCCTG
CAACAATTGC CTGGGCTGTG GAGCAATCTG GGCGTCACCG CCAACCTCAC GCTGCAACAC
AGCCAAGCGG ACAGCAAACG CAGCGATCAG CCGGAAAAGA CCTGGCTACC GCGTGCGCCG
GAGCGCATCT ATAACCTGGA TCTGTTCTAC GACGACACCC ATCTGCGCAT GGACCTGAGC
TACAACTACA CCGGCCTGCA ACTGCTGGGG CTCACCACAG ACCGCCTCAA TTACTACCTG
CAGCCGGTGA AGTCGCTGGA TTTCAACGCG ACCTATCACT TGCCGCACCA CATCGATGTC
GGCGTGGCGG CAAAGAACCT GCTCAATGCC GCCACCTTCT ACGAAACGCA GGGCAAGTCC
AAGCGCTACA TGGCCTACGA TCCAGGCGCC GACGGTGCTT ATGTGCAAAC CGGGCGAACC
TACATGCTGA CCTTGGGCTA CACCTACTGA
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| Protein sequence | MVLSTPSLAC AAEMTATTLD SVNVQATHAA APGSLNEQRL SNSVNSVMSK QQIDAIPSGG
IANVVAHMPG LSAYSDMHLG QATTGENAYV SIRGMDASYN AYTLNGFGMP ETDSSTRAIS
LNMLAPFGIQ SVQVSKSPTP DMPGDSIGGA INMRTPNAFD FAQDVYAKST AQGQFNALAH
HLGGKDSGGT FQQELAWKFG QGDAFGIYAS AYYGKNNNMA QAPAPNSKYV PADPTLAQAT
DLRDVGPLIS TRYKYSLYTS QIERYGGTLS LDWQGDTSAL YARAIYGSYG VTGTQDQSSA
RLETYRKQPT AVRGGYFNTH DIDETLATLQ LGGETTLDRL RFDYGSSFGR GTRSRPDYVS
ASLYGFTPGS FAFDLSDPTY PSIGPSSPAL KDFFYNLDSS LLWKVQGHDA GSHDNRFNAH
TDIAYQVDGA VLNSVKLGLS ADHSEREAYD HPFFHKDGNF VTNGPYFGGP NYAFPTAGGP
PLSAIPGRIT DNAFDGHYAG PFKLLDRGWM RAQALPYKYI DDPNGAGSYT ANDYNANTTS
SNEAIYSGYA MAALHIGAVS VLPGVRYELT RYAADSWQSS GDGRNGSFVD TGSTYGKVLP
GISINYRPDD LTVYRAALRR SFSRPAFGLI SGETVYSIDD TQKVVGISKP NPNLQASTAD
NADLSAEFYD HNGGVLSAST YYKRINGFIY TSQSATSNDS TLGGLVPTGT TFENGVPVTM
PQNGGTAKLY GLELAASKRL QQLPGLWSNL GVTANLTLQH SQADSKRSDQ PEKTWLPRAP
ERIYNLDLFY DDTHLRMDLS YNYTGLQLLG LTTDRLNYYL QPVKSLDFNA TYHLPHHIDV
GVAAKNLLNA ATFYETQGKS KRYMAYDPGA DGAYVQTGRT YMLTLGYTY
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