| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02303 |
|---|
| Symbol | |
|---|
| ID | 6307544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4151581 |
|---|
| End bp | 4152258 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642641282 |
|---|
| Product | two-component system regulatory protein |
|---|
| Protein accession | YP_001915130 |
|---|
| Protein GI | 188578201 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAATTC TAGTAATTGA AGACAACAGC GATATCGCCG CCAATCTGGG CGACTATCTT
GAAGACCGTG GCCACACGGT GGATTTCGCC GCCGATGGCG TCACCGGCCT GCATTTGGCG
GTGGTCCACG AGTTCGACGC CATCGTGCTC GATCTCAACC TGCCCGGTAT GGACGGCATC
GAGGTCTGCC GCAAGCTGCG CAACGAAGCA CGCAAGCAGA CCCCGGTGCT GATGCTGACC
GCGCGCGACT CGCTGGACAA CAAGCTGGCC GGCTTCGACT CCGGTGCCGA CGACTATCTG
ATCAAGCCGT TCGCGCTACA GGAAGTGGAA GTGCGCCTCA ACGCACTGTC GCGTCGTGGT
AAGGGCGTGC ACACCCGCGT GCTGGAAACC GGCGATCTGG AATACAACCT GGATACGCTG
GAAGTGCGCC GCCGCGGCAA GCTGCTGCAG CTCAACCCCA CCGCACTGAA GATCCTGCAG
GCGCTGATGG AAGCCTCCCC GGCCGTGGTC ACGCGCCAGG AGCTGGAAAC CCGCGTCTGG
GGCGAAGAAT TGCCGGATTC GGACTCGCTG CGCGTGCATA TCCACGGGCT GCGCGCCGTG
GTCGACAAGC CCTTCGACGT GGCAATGATC CAGACCCGGC ATGGCATCGG CTACCGCATC
GCCTCGCCCG ATGCCTGA
|
|---|
| Protein sequence | MRILVIEDNS DIAANLGDYL EDRGHTVDFA ADGVTGLHLA VVHEFDAIVL DLNLPGMDGI
EVCRKLRNEA RKQTPVLMLT ARDSLDNKLA GFDSGADDYL IKPFALQEVE VRLNALSRRG
KGVHTRVLET GDLEYNLDTL EVRRRGKLLQ LNPTALKILQ ALMEASPAVV TRQELETRVW
GEELPDSDSL RVHIHGLRAV VDKPFDVAMI QTRHGIGYRI ASPDA
|
|---|
| |