Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02252 |
Symbol | |
ID | 6307431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4032457 |
End bp | 4033143 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641170 |
Product | ISPsy21, transposase OrfB |
Protein accession | YP_001915018 |
Protein GI | 188578089 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCGCT TCATCGACGA CCATCGCGAC GTTCACGGGG TCGAGCCGAT CTGCAAGGTG TTGCCGATCG CCCCGTCGAC GTACTACGCG CACGCGGCCC GAAGGTCCGA TCCTGAGTTG CGCTCGGCAA GGGCCAAGAC GGACGAGGCG TTGATGCCTG AAATCAGGCG TGTGTGGGAC GAGAACTTCC AGGTCTATGG TGTGCGTCAG CTCTGGCGGC AGATGCGGCG GGAGCAGTTC GCTGTTACGC GCTGCACCGT GCAGCGTCTG ATGAAGCGCC AGGGCCTGCG CGGTGTCATC CGCGGCAAGG CGGTGCGCAC GACGGTGAGC GATGCGAAGG CGCCGTGCCC GCTCGATCAC GTCAACAGGC AGTTCACTTC GGATCGGCCA AACGCGTTGT GGGTCTCGGA CTTCACCGAT GTGTCGACGT GGCAAGGCTG GATCTGCGTC GCCTTCGTCA TCGACGTATT CGCACGCCGG ATCGTGGGCT GGAAGGCGTC GCCGTCGATG CGGACCGAGC TGGTGCTCGA TGCGCTCGAG CAGGCGCTGC ATGCGAGGAA GCCGGTCGGA TCGGAGCGTG TGATCCACCA CAGCGACCGG GGTGTGCAGT ACGTCTCGAT CCGCTACACC GAGCGGCTCG CCGAGGCCGG CCTGGAGCCC TCGGTGGGCA GTGTGGGCGA CTCGTAA
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Protein sequence | MKRFIDDHRD VHGVEPICKV LPIAPSTYYA HAARRSDPEL RSARAKTDEA LMPEIRRVWD ENFQVYGVRQ LWRQMRREQF AVTRCTVQRL MKRQGLRGVI RGKAVRTTVS DAKAPCPLDH VNRQFTSDRP NALWVSDFTD VSTWQGWICV AFVIDVFARR IVGWKASPSM RTELVLDALE QALHARKPVG SERVIHHSDR GVQYVSIRYT ERLAEAGLEP SVGSVGDS
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