Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02232 |
Symbol | |
ID | 6307451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4050231 |
End bp | 4051232 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642641190 |
Product | arabinose 5-phosphate isomerase |
Protein accession | YP_001915038 |
Protein GI | 188578109 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTCT CGCGCCTGCC TTCCGCCACC GTCAGCGACG CCAGTCTGGT TGCCAGCGGT CAGCGCGTGC TGGAGATCGA GCGCGAGGCG CTGGCCAACG TGGGCGCGCG CATCGGCAGC GAGTTCGCCG CGGCCTGCCG GCTGGTGCTG GCCTCGCGCG GGCGGGTGGT CGCCACCGGC ATGGGCAAGT CCGGCCATGT GGCGCGCAAG ATCGCTGCCA CCCTCGCCTC CACCGGCACT CCGGCGTTCT TCGTGCACCC CGGCGAAGCC GGCCATGGCG ACCTGGGCAT GATCACCGAG GCCGACATCG TGCTGGCGCT GTCGTATTCG GGGGAATCGG ACGAAGTGCG CATGCTGCTG CCGGTGCTCA AGCGCCAGGG CAACCCGATC ATCGCCATGA CCGGCCGCAC CAGTTCCACC CTGGCCCAGG CCGCCGACGT GCACCTGGAC GTCAGCGTCT CCGCCGAGGC CTGCCCGTTG CATCTGGCAC CCACCTCCAG CACCACCGCC TCGCTGGCGA TGGGCGATGC GCTGGCAGTC GCCTTGCTCG ATGCGCGCGG CTTCACCGCC GACGACTTCG CGCGTTCGCA TCCGGCCGGC AGCCTGGGCC GGCGCCTGCT GCTGCACATC ACCGACGTGA TGCATGCCGG CGACGACCTG CCGCGTGTGC GTGAAGACGC CAGCCTGAGC GAGGCGCTGA TGGAAATGAG CCGCAAGCGG CTGGGCATGA CCGCCGTGGT GGACAACGAC GAGCGCCTGA TCGGGCTGTT CACCGACGGC GACCTGCGCC GCGCACTGGA CAGCGACATC GACGTGCGCA GCGCCGGCAT CGCACAGGTG ATGACGCGCA ACCCGCGCAC CATCGGCGCC GACCAGCTGG CCGCCGAGGC GGCGCGGCTG ATGGAGGACT ACAAGATCAA CGGCCTGATC GTGGTCGATG CGCAGCAGCG CGCGGTGGGC GCATTGAACA TTCACGACCT GTTGCGCGCC AAGGTGGTTT AA
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Protein sequence | MAVSRLPSAT VSDASLVASG QRVLEIEREA LANVGARIGS EFAAACRLVL ASRGRVVATG MGKSGHVARK IAATLASTGT PAFFVHPGEA GHGDLGMITE ADIVLALSYS GESDEVRMLL PVLKRQGNPI IAMTGRTSST LAQAADVHLD VSVSAEACPL HLAPTSSTTA SLAMGDALAV ALLDARGFTA DDFARSHPAG SLGRRLLLHI TDVMHAGDDL PRVREDASLS EALMEMSRKR LGMTAVVDND ERLIGLFTDG DLRRALDSDI DVRSAGIAQV MTRNPRTIGA DQLAAEAARL MEDYKINGLI VVDAQQRAVG ALNIHDLLRA KVV
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