Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02221 |
Symbol | |
ID | 6307462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4058354 |
End bp | 4058746 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642641201 |
Product | sugar transport protein |
Protein accession | YP_001915049 |
Protein GI | 188578120 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.201475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTGTG GCATTCTCCT GATTACTCAT CCCGGCATCG GCGCCGCGTT GTTGAACGTG GCGACAGGCC TGTTGCGGCA GTTGCCGTTG AAGACCGAAG CATTCGATGT GCCGTTCGAT GCAGACCTGG ACGCGTTGCT GCCCCAGGCG TCGTCGGCGA TGCGCAGAGT CGACAGCGGC GACGGCGTGC TGGTCATAAC CGACCTGTAC GGCGCCAGCC CCAGCAATCT CGCCAATCGC CTGGCCAAGC TGGGCACACC GGTTCGCCGG GTGTCCGCAC TGAGCCTGCC GATGCTGCTG CGGGTGATGA ACTACCCCGA ACAAGGATTG CAGGAGCTGC CCGCCACTGC GGCGGCCGGT ACTCGCAATG GAGCGATCAT CGACGATGCT TGA
|
Protein sequence | MACGILLITH PGIGAALLNV ATGLLRQLPL KTEAFDVPFD ADLDALLPQA SSAMRRVDSG DGVLVITDLY GASPSNLANR LAKLGTPVRR VSALSLPMLL RVMNYPEQGL QELPATAAAG TRNGAIIDDA
|
| |