Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02208 |
Symbol | |
ID | 6307475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4072271 |
End bp | 4073653 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642641214 |
Product | amino acid transporter |
Protein accession | YP_001915062 |
Protein GI | 188578133 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.411846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGACA CACCACGCCG CGACGATGCG GCCACGCTGG AACGCTTCGG CTACGCACAA GAGCTCAAGC GGCAGCTCAC GCTCAAGGAT CTGTTGATCT ACGGGCTGGT GTCCATGGTG CCGACGGCGC CGTTCTCGAT CTTCGGCGGC GTCTTCGACA TCAGCGCCGG AATGGTGCCG CTGACCTATC TGGTCGGCTT CGTGGCGATG CTGTTCACCG CGCTGAGCTA CCAGCAGATG TCGCAGGCAT TTCCGGTGGC TGGCTCGGTG TATGCCTACG TCGGGCGCGG GCTGAACAGC GGCATGGGCT TTCTGGCTGG TTGGGCGATT CTGCTCGACT ATCTGCTGGT ACCGACGCTG CTGTATGTGG TCGGCGCCAA CGCGATGTAC AACGTGGTGC CGGCAGTGCC GCAGCCGGCG TGGATCGGGT TCTTCGTCGT GCTCAACACG GTGGTCAACC TACGCGGTAT CGAAACCACC GCACGTGCCA ATCGCTTTTT TCTGCTTGGC CAGTTGGTGG TATTGGCGGT ATTCCTGGTG CTGGCGACGT TGGCGATCCA GCGCGGCGTC AATGGCGCGC ACTGGAGTTG GCGCCCCATC TATGACCCGC AAGCGTTTTC CCCACACGTG ATCTTCAGCG CATTGTCGGT GGCGGTGGTG TCGTTCCTCG GCTTCGATGC GATCTCCACC TTGTCCGAAG AGGCGCGCGG CGGCAACCGT GTGGTGGGGC GTGCCACCTT GCTCGCGTTG CTGATCGTGG CAGGCGTATT CGTCTTGCAA ACCTGGCTGG CGGCATTGCT GCAACCCACC CTGCAGCGCT ACCCCAGTGC GCAAGCATCC AACGATGCGT TCTTCGAGAT CGGGCGATTG ATCGCCGGGC CATGGCTGCA GATCGTCATT GCGCTCACGG TCGCCATCAG CGCGGCAATC GCCAATTCGC TGGTGGCACA AGCGGCCACA TCGCGCCTGT TGTTCGCCAT GGCGCGCGAC CGCCAGTTGC CGGCCTTCCT GCGCTACATC CACCCGCGTA CCGCCGTGCC GCAGCGTGCG ATCTTGCTGG TGGCGGGGCT AAGCATCGTA CTGGGCGAAG TCTTCGTCGG CCAAATTGCC TTGCTGTCGT CGCTGTGCAA CGTCGGCGCA CTGACTGCCT TCGTGCTGCT GCATATCGCA GTGCTATGGC ACTTCCGCGC CCAGGGCCGG CGCGTGCTGC ATGGCCTGGC ACCGTTGATC GGCATCGTCA TCCTTGCCTA CGTATTACTC AATGCCGACA CGCATGCGCA ACTGGGTGGC ACCGCGTGGA TGGTGGTGGG ACTGACGGTA CTGGCGTTTC TGAAACTCAG CGGACGTTCT ACCGAATTTC GCGCCAGCGA CGCAGTGGAA TAG
|
Protein sequence | MTDTPRRDDA ATLERFGYAQ ELKRQLTLKD LLIYGLVSMV PTAPFSIFGG VFDISAGMVP LTYLVGFVAM LFTALSYQQM SQAFPVAGSV YAYVGRGLNS GMGFLAGWAI LLDYLLVPTL LYVVGANAMY NVVPAVPQPA WIGFFVVLNT VVNLRGIETT ARANRFFLLG QLVVLAVFLV LATLAIQRGV NGAHWSWRPI YDPQAFSPHV IFSALSVAVV SFLGFDAIST LSEEARGGNR VVGRATLLAL LIVAGVFVLQ TWLAALLQPT LQRYPSAQAS NDAFFEIGRL IAGPWLQIVI ALTVAISAAI ANSLVAQAAT SRLLFAMARD RQLPAFLRYI HPRTAVPQRA ILLVAGLSIV LGEVFVGQIA LLSSLCNVGA LTAFVLLHIA VLWHFRAQGR RVLHGLAPLI GIVILAYVLL NADTHAQLGG TAWMVVGLTV LAFLKLSGRS TEFRASDAVE
|
| |