| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02198 |
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| Symbol | |
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| ID | 6307485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4081337 |
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| End bp | 4084483 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642641224 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001915072 |
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| Protein GI | 188578143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.533301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAGCT TCAAGTCGAA GGCCATGTTC ACCTTCGTTG GCGGCCTGTT GGTCGTCAAT
CCCGCGTTTG CGCAGGATGT CGCTCCGCCG CCTGCACCGG CCCCGCAGTC CAGCAGTGCT
TCTGCGACCA CCCTGGATGC CGTCAACGTG ACCGCTATCC GCAACAGCCT CAACCAATCG
ATGGGCATCA AGCGCGATGC TGCCGGCGTG GTGGATGCGA TCAGCGCCGA AGACATCGGC
AAGTTTCCGG ACACCAACCT GGCCGAATCG CTACAACGCA TCACCGGTAT TTCCATCGAA
CGTCGCGATG GCGAAGGCGC ACAGGTCACC GCGCGCGGCT TCGGCCCGCA GTTCAACACG
GTCACCCTCA ACGGCCGCCT GATTCCTGGT GCCGATGCGT TCGGTGCGCC CGGCCAGACG
CCGATCGGCG GTGTGGATGT CGGCACGCGC GCCTTCAACT TCGCCCAGCT CGCTTCCGAA
GCCATCACCG GCATCGAGGT GTTCAAGACC AGCCGCGCGA CTGCGCCTAG CGGCGGTATC
GGCGCGACGA TCAACATCCA GACCGACAAG CCGTTCAATC ACGACGGCGT GGTGGCCAAT
GCGGGCGCCA AGATGGTGTC GGACCGCTCC GAGCCCTTCG GCGATGCGCT CACCCCGGAA
GTATCGGGCA TCTTCAGCTA TACCAATCCG GAAAAGACCT TTGGTATCGG CTTGAGCGCC
AGTTACCAGA AGCGCCACGG CGGTTCGGTG CAGGCCACCG AAAACGCCTG GAATATCCAG
CGCTGGACCG GCACCGACCC GGCGCTGCGC CCGGACGCGG TGGTGACCAA TGCCCCCGCG
ATCGGCCAGT TGTATGGCAT GCCCAACGAT CTGCGCTACG CCTTCGCCGA TTTCCAACGC
GAACGCATGA ACGGCCAGGC GGTGATGCAG TTCGCGCCCA CCGACAGCCT GACCCTGACC
CTGGATTACA CCTATTCGGC CAATGAAATT CGCGAAGAGC GCGGCGAGCA GGGCATCTGG
CTGCAGCGCG CCAACAGCTT CACCGATCTG ACCTTCGATA CCGGCCAGGC CGTTGCCACG
CCGGTCTATC TGCGCGATGT GCCCAACGGC GCGAAGGACT TCGGCATGGA GCAACAGCGC
AACGAACAGA AGTACACGCT CGGCTCATTG GGCTTCAACG CGGATTGGCA AGTGAGCGAT
CGCTTCCAGC TGAGTTTCGA TGCGCACAAT TCGAAGACGC AAAGCCTGCC CAACGACCCG
ACCACGGGCG GCAGCGCGAC CTACTTCAGC TTCGCCGGCA CCAACAACTG CACCAATGGG
CCGTACTGCG GCGGCCAATG GGGACAGGAA CTGTGGTTCA ACAATTCCTT GCCGATCGGC
GCACGCACCT GGTATCCCAC CGCAGCCGAT TCGCTGGCAA ACACCAATGG CGTGGTCAAT
CCCGCTTTCA CGCCTGCCGA GCTCGGCTCG CAGGTGCTGC GCATTTTCTA CCAGAAGCAG
GTGACCGAAA CCAAGGAAGG GCGCCTGGAC GGCAAGTTCG ACTTTGACGA CGGGCGTTTC
CAGTTTGGCG TGAGCTCGAC CAACACCACC ATGCAGCGCC GTATCAGCGA TACCAACTCG
CCGCTGGGCG ATTGGGGCGT GGCCAATGCA GGCAACGAGC CGGGAATGGT CGCGCTGCTG
CAACCGGTGA GCATCACGGG CATGTTCAAG GATTTCAATC CCACCGGCGC CGCGTCCAGT
GCATGGCGTG GCGATGCCGA TCAGTTGGCT CTGTGGGGAG GACGCCAGTA CGGCGCGACC
ACGCGCTACA ACCCGCAATA CACGGCCGAT AACCGGGTGG AAGAAAAGAC CCGCGCGGCC
TACGTGCAGT TGGAAATTGC CGGTGCCATC GCCGGGATGA CCACCAACAC GCGCCTGGGT
CTGCGCTACG AGCGCACCGA CGTGGAATCC ACCTCGCAGG TGGCCACGCC GACCGCGCTG
CTGTGGCTGT CCAACAACGA TTTCGAGTTG ATCCGTTCCA CCGACCAGCA GCCTTTCAGC
GAGGGGACCA GCTACAACTA CATCCTTCCG AACATGGACT TCAGCATCGA TTTCACCGAT
CAGCTGAAAG GTCGTGCCTC GTTCGGTCAG ACCATTGCGC GCGCGCCGTA TAACACTCTC
ATCGCCGGCC CCACGCCCAA TACCCCTAAC GGCTCGATCC TGATCAACCC GTCCAACCGC
GCCGGTGGCG GCTCGCAGAC GCCCACCCTC AATCCGTTGG AATCGGACAA CCTCGATCTG
GCCCTGGAGT GGTATTTCGC TGACGCCAGC TACATCTCAG CGACGTTCTG GAATAAGCGC
GTGAGCAATT TCATCGGCAA TACCGTCACG CGTGAATCGC TGTACGGACT GACCGATCCC
ACCTCGGGAC CGGATGCTCA GAGCGCGCTG GCGTTCCTGC AAAGCGGTGC CTGCGCCGCC
CAGGTGCGCG CAGCGGGTAA CGACGTCGCC AGTGCCTGTT CGGCCAACGA CACCTCGCTG
TTCGCGGCAA TGGCCTTGCT ACGCAATGCG GCTGCGACCG GCGGGCTGAA TGCCTATAAC
GGCAGTTCGG CGCAGAGCCT GGCGCTGGAG AACGCCTACG ATATCGCCGG CAATGCCTCC
GACCCGTTGT ATCAGTTCGA CGTGTCGCGG CCGATCAACC AGAACAAGGC CAACATCCAC
GGCTGGGAAC TGGGTGGGCA GTACTTCTTC GGCAGCACCG GTTTCGGCAT CTACGCCAAC
TACACCATCG TTCAAGGGGA TGTGGCGTTC GACAACACCG TGATCGACCG CGATCAGTTC
GCGTTGCTCG GTCTGAGCGA CACCGCCAAC GTCATGCTGA TGTACGAGAA GTATGGCTGG
AGCGCACGCC TGGCCTGGAA CTGGCGTGAC GAGTACCTGA TCGCTGCCAA CCAGGACAAT
GCCAACCGCA ACCCGTATTA CGTGGAGCCC TACCAGCAGT TCGACCTCAG CGTCAGCTAC
GCATTCAACA AGCAGCTGTC GGTTGGCTTC GAGGCGATCA ACCTGACCGG TGAAGATGTG
CGCTGGCATG GTCGTTCGGA AAAGCAGATC ATCCGCTTGA TCGACCAGCA GCCGCGTTAC
ACGCTGGGTG TGCGGTACGC GTTCTGA
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| Protein sequence | MNSFKSKAMF TFVGGLLVVN PAFAQDVAPP PAPAPQSSSA SATTLDAVNV TAIRNSLNQS
MGIKRDAAGV VDAISAEDIG KFPDTNLAES LQRITGISIE RRDGEGAQVT ARGFGPQFNT
VTLNGRLIPG ADAFGAPGQT PIGGVDVGTR AFNFAQLASE AITGIEVFKT SRATAPSGGI
GATINIQTDK PFNHDGVVAN AGAKMVSDRS EPFGDALTPE VSGIFSYTNP EKTFGIGLSA
SYQKRHGGSV QATENAWNIQ RWTGTDPALR PDAVVTNAPA IGQLYGMPND LRYAFADFQR
ERMNGQAVMQ FAPTDSLTLT LDYTYSANEI REERGEQGIW LQRANSFTDL TFDTGQAVAT
PVYLRDVPNG AKDFGMEQQR NEQKYTLGSL GFNADWQVSD RFQLSFDAHN SKTQSLPNDP
TTGGSATYFS FAGTNNCTNG PYCGGQWGQE LWFNNSLPIG ARTWYPTAAD SLANTNGVVN
PAFTPAELGS QVLRIFYQKQ VTETKEGRLD GKFDFDDGRF QFGVSSTNTT MQRRISDTNS
PLGDWGVANA GNEPGMVALL QPVSITGMFK DFNPTGAASS AWRGDADQLA LWGGRQYGAT
TRYNPQYTAD NRVEEKTRAA YVQLEIAGAI AGMTTNTRLG LRYERTDVES TSQVATPTAL
LWLSNNDFEL IRSTDQQPFS EGTSYNYILP NMDFSIDFTD QLKGRASFGQ TIARAPYNTL
IAGPTPNTPN GSILINPSNR AGGGSQTPTL NPLESDNLDL ALEWYFADAS YISATFWNKR
VSNFIGNTVT RESLYGLTDP TSGPDAQSAL AFLQSGACAA QVRAAGNDVA SACSANDTSL
FAAMALLRNA AATGGLNAYN GSSAQSLALE NAYDIAGNAS DPLYQFDVSR PINQNKANIH
GWELGGQYFF GSTGFGIYAN YTIVQGDVAF DNTVIDRDQF ALLGLSDTAN VMLMYEKYGW
SARLAWNWRD EYLIAANQDN ANRNPYYVEP YQQFDLSVSY AFNKQLSVGF EAINLTGEDV
RWHGRSEKQI IRLIDQQPRY TLGVRYAF
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