| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02182 |
|---|
| Symbol | aroK |
|---|
| ID | 6307497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 4096332 |
|---|
| End bp | 4096874 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642641236 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_001915084 |
|---|
| Protein GI | 188578155 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCG CACCCAATCT CGTGATGGTC GGCCCGATGG GCGCCGGAAA AAGCTGCATA
GGCCGTCGCC TGGCCGAGCG CTTCGGGCTG GAGTTCGTCG ATGTGGACCA GGCCATCGTC
GAACAGGTGG GCAGCAGCAT CCCGGCGATC TTCGCGCAGC ATGGCGAAGC CGGGTTTCGG
CAGCATGAGG CGGACACCTT GCAGGCGCTG CTGGAACAGG ACAACAAACT GATTTCCACC
GGTGGCGGCA CGGTGCTGGA TCCGCACAAC CGCCAGCGCA TCTGCGCACG TGGGTTTGTG
GTGCATCTGC ATGTCAGCGT GCCGACGCAG CTGACACGGC TGGCGCGCGA CCGCAATCGC
CCGCTGTTGC AACGCGCCGA CCGCGAGCAG CTGCTGCATG CGATGGCTGC GCACCGCACG
CCGCTGTATC ACGAGGTTGC CGACCTCAGC CTGGAAACCG ATCATTTTTC CCCCGCCGAG
GCCACCGCGC AGCTGGTGCT GCGCCTGGCC GCGCAATGGC GCATGTCGAG TGCCCCCGCA
TGA
|
|---|
| Protein sequence | MNPAPNLVMV GPMGAGKSCI GRRLAERFGL EFVDVDQAIV EQVGSSIPAI FAQHGEAGFR
QHEADTLQAL LEQDNKLIST GGGTVLDPHN RQRICARGFV VHLHVSVPTQ LTRLARDRNR
PLLQRADREQ LLHAMAAHRT PLYHEVADLS LETDHFSPAE ATAQLVLRLA AQWRMSSAPA
|
|---|
| |