| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02172 |
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| Symbol | talC9a |
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| ID | 6307503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 4101543 |
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| End bp | 4104803 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642641241 |
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| Product | TAL effector AvrBs3/PthA |
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| Protein accession | YP_001915089 |
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| Protein GI | 188578160 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCTAC GCACGCTCGG CTACAGTCAG CAGCAGCAAG AGAAGATCAA ACCGAAGGTG
CGTTCGACAG TGGCGCAGCA CCACGAGGCA CTGGTGGGCC ATGGGTTTAC ACACGCGCAC
ATCGTTGCGC TCAGCCAACA CCCGGCAGCG TTAGGGACCG TTGCTGTCAC GTATCAGGAC
ATAATCAGGG CGTTGCCAGA GGCGACACAC GAAGACATCG TTGGCGTCGG CAAACAGTGG
TCCGGCGCAC GCGCCCTGGA GGCCTTGCTC ACGGAGGCGG GGGAGTTGAG AGGTCCGCCG
TTACAGTTGG ACACAGGCCA ACTTCTCAAG ATTGCAAAAC GTGGCGGCGT GACCGCAGTG
AAGGCAGTGC ATGCATGGCG CAATGCACTG ACGGGTGCCC CCCTGAACCT GACCCCGGCA
CAGGTGGTGG CCATCGCCAG CCACGATGGC GGCAATCAGG CGCTGGAGAC GGTGCAGCGG
CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCCGG CGCAGGTGGT GGCCATCGCC
AGCCACGATG GCGGCAAGCA GGCTCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC
CAGGACCATG GCCTGACCCC GGACCAGGTC GTGGCCATCG CCAGCCACGA TGGCGGCAAG
CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC
CCGGCGCAGG CGGTGGCCAT CGCCAGCAAT GGCGGCGGCA AGCAGGCGCT GGAGACGGTG
CAACGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA GGTGGTGGCC
ATCGCCAGCA ATGGCGGCAA GCAGGCGCTG GAGACGGTGC AGCGGCTGTT GCCGGTGCTG
TGCCAGGACC ATGGCCTGAC CCCGGACCAG GTCGTGGCCA TTGCCAGCAA TAACGGCGGC
AAGCAGGCGC TGGAGACGGT GCAGCGGCTG TTGCCGGTGC TGTGCCAGGA CCATGGCCTG
ACCCCGGACC AGGTCGTGGC CATCGCCAGC CACGATGGCG GCAAGCAGGC GCTGGAGACG
GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG GACCATGGCC TGACCCCGGA CCAGGTCGTG
GCCATCGCCA GCCACGATGG CGGCAAGCAG GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG
GTGCTGTGCC AGGACCATGG CCTGACCCCG GACCAGGTGG TGGCCATCGC CAGCAATGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC
CTGACCCTGG CGCAGGTGGT GGCCATCGCC AGCAATATTG GCGGCAAGCA GGCGCTGGAG
ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC CAGGACCATG GCCTGACCCC GGACCAGGTC
GTGGCCATCG CCAGTAATAT TGGCGGCAAG CAGGCGCTGG AGACGGTGCA GCGGCTGTTG
CCGGTGCTGT GCCAGGACCA TGGCCTGACC CCGGACCAGG TCGTGGCCAT CGCCAGCAAT
AACGGCGGCA AGCAGGCGCT GGAGACGGTG CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC
CATGGCCTGA CCCCGGACCA GGTCGTGGCC ATCGCCAGCC ACGATGGCGG CAAGCAGGCG
CTGGAGACGG TGCAGCGGCT GTTGCCGGTG CTGTGCCAGG ACCATGGCCT GACCCCGGCG
CAGGTGGTGG CCATCGCCAG CCATATTGGC GGCAAGCAGG CGCTGGAGAC GGTGCAGCGG
CTGTTGCCGG TGCTGTGCCA GGACCATGGC CTGACCCTGG ACCAGGTGGT GGCCATTGCC
AGCAATGACG GCAGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC
CAGGACCATG GCCTGACCCC GGACCAGGTG GTGGCCATCG CCAGCCACGA TGGCGGCAAG
CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGACCA TGGCCTGACC
CCGAACCAAG TGGTGGCCAT CGCCAGCAAT ATTGGCGGCA AGCAGGCGCT GGAGACGGTG
CAGCGGCTGT TGCCGGTGCT GTGCCAGGCC CATGGCCTGA CCCCGGACCA GGTCGTGGCC
ATCGCCAGCC ACGATGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGA ACCATGGCCT GACCCCGGAC CAGGTCGTGG CCATCGCCAG CAATGGCGGC
GGCAAGCAGG CGCTGGAGAC GGTGCAACGG CTGTTGCCGG TGCTGTGCCA GGACCATGGC
CTGACCCCGG ACCAGGTCGT GGCCATCGCC AGCAATGGCG GCGGCAAGCA GGCGCTGGAG
AGCATTGTTG CCCAGTTATC TCGCCCTGAT CCGGCGTTGG CCGCGTTGAC CAACGACCAC
CTCGTCGCCT TGGCCTGCCT CGGCGGACGT CCTGCCCTGG ATGCAGTGAA AAAGGGATTG
CCGCACGCGC CGGAATTGAT CAGAAGAATC AATCGCCGTA TTCCCGAACG CACGTCCCAT
CGCGTTGCCG ACCTCGCGCA CGTGGTGCGC GTGCTTGGTT TTTTCCAGAG CCACTCCCAC
CCAGCGCAAG CATTCGATGA CGCCATGACG CAGTTCGGGA TGAGCAGGCA CGGGTTGGTA
CAGCTCTTTC GCAGAGTGGG CGTCACCGAA CTCGAAGCCC GCTGCGGAAC GCTCCCCCCA
GCCTCGCAGC GTTGGGACCG TATCCTCCAG GCATCAGGGA TGAAAAGGGC CAAACCGTCC
CCTACTTCAG CTCAAACACC GGATCAGGCG TCTTTGCATG CATTCGCCGA TTCGCTGGAG
CGTGACCTTG ATGCGCCCAG CCCAATGCAC GAGGGAGATC AGACGCGGGC AAGCAACCGT
AAACGGTCCC GATCGGATCG TGCTGTCACC GGCCCCTCCA CACAGCAATC TTTCGAGGTG
CGCGTTCCCG AACAGCGCGA TGCGCTGCAT TTGCCCCTCA GCTGGAGGGT AAAACGCCCG
CGTACCAGGA TCGGGGGCGG CCTCCCGGAT CCTGGTACGC CCATCGCTGC CGACCTGGCA
GCGTCCAGCA CCGTGATGTG GGAACAAGAT GCGGCCCCCT TCGCAGGGGC AGCGGATGAT
TTCCCGGCAT TCAACGAAGA GGAGCTCGCA TGGTTGATGG AGCTATTGCC TCAGTCAGGC
TCAGTCGGAG GGACGATCTG A
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| Protein sequence | MDLRTLGYSQ QQQEKIKPKV RSTVAQHHEA LVGHGFTHAH IVALSQHPAA LGTVAVTYQD
IIRALPEATH EDIVGVGKQW SGARALEALL TEAGELRGPP LQLDTGQLLK IAKRGGVTAV
KAVHAWRNAL TGAPLNLTPA QVVAIASHDG GNQALETVQR LLPVLCQDHG LTPAQVVAIA
SHDGGKQALE TVQRLLPVLC QDHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQDHGLT
PAQAVAIASN GGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNGGKQAL ETVQRLLPVL
CQDHGLTPDQ VVAIASNNGG KQALETVQRL LPVLCQDHGL TPDQVVAIAS HDGGKQALET
VQRLLPVLCQ DHGLTPDQVV AIASHDGGKQ ALETVQRLLP VLCQDHGLTP DQVVAIASNG
GKQALETVQR LLPVLCQDHG LTLAQVVAIA SNIGGKQALE TVQRLLPVLC QDHGLTPDQV
VAIASNIGGK QALETVQRLL PVLCQDHGLT PDQVVAIASN NGGKQALETV QRLLPVLCQD
HGLTPDQVVA IASHDGGKQA LETVQRLLPV LCQDHGLTPA QVVAIASHIG GKQALETVQR
LLPVLCQDHG LTLDQVVAIA SNDGSKQALE TVQRLLPVLC QDHGLTPDQV VAIASHDGGK
QALETVQRLL PVLCQDHGLT PNQVVAIASN IGGKQALETV QRLLPVLCQA HGLTPDQVVA
IASHDGGKQA LETVQRLLPV LCQNHGLTPD QVVAIASNGG GKQALETVQR LLPVLCQDHG
LTPDQVVAIA SNGGGKQALE SIVAQLSRPD PALAALTNDH LVALACLGGR PALDAVKKGL
PHAPELIRRI NRRIPERTSH RVADLAHVVR VLGFFQSHSH PAQAFDDAMT QFGMSRHGLV
QLFRRVGVTE LEARCGTLPP ASQRWDRILQ ASGMKRAKPS PTSAQTPDQA SLHAFADSLE
RDLDAPSPMH EGDQTRASNR KRSRSDRAVT GPSTQQSFEV RVPEQRDALH LPLSWRVKRP
RTRIGGGLPD PGTPIAADLA ASSTVMWEQD AAPFAGAADD FPAFNEEELA WLMELLPQSG
SVGGTI
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