Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02161 |
Symbol | |
ID | 6307401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 4004975 |
End bp | 4005520 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642641141 |
Product | transposase |
Protein accession | YP_001914989 |
Protein GI | 188578060 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.639541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGTAG GCGAGCGTGC ACCGTTGCTG TGGCCCACCA AGGCCAACCC GGTGTGGTCC ATGGACGTCG TGTTCGACCG CACCGCCGAA GGCAGGGCAA TCAAATGCCT GGTGATCGTG GACGACGCAA CCCACGAAGC GGTCGCCATC GACGTGGAGC GTGCGATCTC GGGACACGGC GTTGTGCGCG TGCTGGATCG GTTGGCACAC AGTCGTGGCC TGCCGAAGAT GATCCGCACC GACAACGGCA AGGAGTTCTG TGGCAAGGCC ATGGTCGCCT GGGCGCATGC CAATCGTGTG CAGCTACGCC AGATCCAGCC TGGCAAGCCG AACCAGAATG CCTACGTCGA ATCCTTCAAC GGCCGGCTAC GCGACGAATG CCTCAACGAA CACTGGTTCC CAACGCTGCT GCATGCGCGC ACCGAGATCG AACGCTGGCG CCGCGAATAC AACGAACACC GCCCCAAAAA AACAATCGGC GGAATGACGC CGGCGGCCTA TGCCCAGCAG TTGGCCAATA GCGATATCAT CAACCCCGGA CTCTAA
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Protein sequence | MPVGERAPLL WPTKANPVWS MDVVFDRTAE GRAIKCLVIV DDATHEAVAI DVERAISGHG VVRVLDRLAH SRGLPKMIRT DNGKEFCGKA MVAWAHANRV QLRQIQPGKP NQNAYVESFN GRLRDECLNE HWFPTLLHAR TEIERWRREY NEHRPKKTIG GMTPAAYAQQ LANSDIINPG L
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