| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02158 |
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| Symbol | clpB |
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| ID | 6307403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 4006831 |
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| End bp | 4009527 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642641143 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_001914991 |
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| Protein GI | 188578062 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.46606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCTATC AACTGCCGAT TTCCTCACCG GCAAGCCTTG AAACCGCGCT CGGCAACCGC
ATCTGCACGG TATCGCCGGC GTTGCCGGCC ACCAGTTCAG AGGATTTCCC CATGCGGATG
GACAAGCTCA CCTCGCGGTT CCAGCAGGCG CTGGCCGACG CGCAGTCGCT GGCTGTGGGC
CGCGACCACA ACATCATCGA GCCGGTGCAC GTGCTGGCCG CGCTGCTCGA CCAAAGTGGC
GGCAGCACGC GTCCGCTGCT GTCGCAGGCC GGCGTCAACG TGCCGTTGCT ACGCGAACGG
CTGGGCGAGG CGCTGGACAC GTTGCCCAAG GTGTCCGGGC AGGAAGGCAA TCTGTCGATC
GGCAACGACC TCAACCGCCT GCTCAACCAG ACCGACAAGC TCGCCCAGCA ACATGGCGAT
GCGTTCATCG CCAGCGAATG GTTCGTGCTG GCCGCCGCCG ACGATGCCAG CCCGCTGGGC
GTGGCGTTGC GCGCGGCCGG TGGCGACAAG AAGAAGATCG AGGCGGCCAT CGACAAGCTG
CGTGGCGGCG AAACAGTGCA ATCGGAAAAT GCCGAAGAGC AGCGCCAGGC GCTGGAAAAA
TACACCATCG ACCTGACCGC GCGTGCCGAA AGCGGCAAGC TCGATCCGGT GATCGGCCGC
GATGAAGAAA TCCGCCGCAC CATCCAGGTC TTGCAGCGCC GTACCAAGAA CAACCCGGTG
CTGATCGGCG AACCCGGCGT GGGCAAGACC GCCATTGTCG AGGGCCTGGC CCAGCGCATC
ATCAACGGCG AAGTGCCTGA AGGCCTGCGC GGCAAGCGCG TGCTGTCGCT GGACATGGGC
GCGCTGATTG CCGGTGCCAA ATTCCGCGGC GAATTCGAAG AACGCCTGAA GGCGGTGCTC
AGCGACCTTT CGAAGACCGA AGGCCAGATC ATCCTGTTCA TCGACGAGCT GCATACCATG
GTCGGTGCCG GCAAGGCCGA TGGTGCGATG GATGCCGGCA ACATGCTCAA GCCGGCGCTG
GCACGCGGCG AGCTGCATTG CATTGGCGCC ACCACGCTGG ACGAATACCG CAAATACATC
GAAAAAGACG CGGCATTGGA GCGCCGCTTC CAGAAAGTGT TCGTCGGCGA GCCGACCGTG
GAAGACACCA TTGCGATCCT GCGCGGCCTG AAGGAGCGCT ACGCGGTGCA TCACGGCGTG
GAGATTACCG ACCCGGCGAT CGTCGCCGCT GCCACGCTCT CAAATCGCTA CATCACCGAC
CGCCAGCTGC CGGACAAGGC CATCGACCTG ATGGACGAAG CCGCCTCCCG CATTCGCATG
GAGATCGACT CCAAGCCGGA GGAGCTTGAT CGCCTGGAGC GCCGCCTGAT CCAGCTCAAG
ATCCAGCGCG AGATGTTGAA GAAGGAAAAG GATGACGCCT CGCGCCAGCG CCTGGCGGAC
CTGGAAAGCG ATATCGACAA GCTCGAACGC GAGTTCTATG ACCTAAACGA ACTGTGGAAG
TCCGAGAAGG CCGCGCTGCA GGGCACCACC AAGATCAAGG AGCAGATCGA GCACGCCAAG
CTGGAACTGG AGGCCGCACA GCGCCGCCAG GACTACGCCA AGATGAGCGA GATCCAGTAC
GGCGTGTTGC CACAACTGGA AAAGCAGATG CTGATCGCCA ACGAAGTCGA GCACCACGAC
TTCAAGCTGG TGCAGGACCG CGTGACCGCC GAGGAAATTG CCGAAGTTGT ATCGCGCTGG
ACCGGCATTC CGGTCAACAA GATGCTGGAA GGCGAGCGTG ACAAGTTGCT GCGCATGGAA
GACGAGCTGC ATCACCGCGT GGTCGGCCAG AACGAGGCGA TCAAGGTGGT GTCCGATGCG
GTACGGCGTT CGCGCGCCGG CTTGTCCGAT CCCAATCGCC CGAGCGGTTC GTTTCTGTTC
CTGGGCCCGA CCGGCGTGGG CAAGACCGAG TTGTGCAAGG CGCTGGCCGA TTTCCTGTTC
GACAGCACCG AAGCGATGAT TCGCATCGAC ATGAGCGAGT TCATGGAGAA GCATGCGGTG
GCGCGCCTGA TCGGTGCGCC TCCGGGCTAC GTGGGCTATG AAGAAGGCGG TTATCTCACC
GAGGCGGTGC GTCGTCGTCC GTATGCGTTG ATCCTGTTGG ATGAAGTGGA AAAGGCGCAT
GCCGATGTCT TCAACATCCT GTTGCAAGTG CTCGACGACG GCCGTCTCAC CGATGGGCAG
GGTCGCACCG TGGACTTTCG CAACACCGTC ATCGTGATGA CCTCCAACCT GGGTTCGCAT
CAGATCCAGG AGCTGTCCGG CGATGGTAGC GCCGAGGCCT ACACGCAGAT GAAGGCAGCA
GTCATGGGCG TGGTGCAGGC GCACTTCCGC CCGGAGTTCA TCAACCGGCT CGACGACATC
GTGGTGTTCC ATCCGCTGGA CAAGGCGCAG ATCAAATCGA TTGCGCGCAT CCAGTTGCAA
GGTCTGGAAA AGCGCCTGGC CGAGCGCGGC CTCAGACTGG ACCTGGACGA TGCGGCGCTG
GAGCTGCTGG GCAATGTCGG CTTCGACCCG GTGTACGGCG CGCGCCCGCT CAAGCGCGCG
ATCCAGGCGC AGGTGGAGAA CCCGCTGGCC CAGCAGATCC TGTCCGGCCA GTACGCCAGC
GGCGAGACCG TGCGTGTGCG TGCCCAGGGT GGACGGCTGG AATTCGGCAA GGCTTGA
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| Protein sequence | MVYQLPISSP ASLETALGNR ICTVSPALPA TSSEDFPMRM DKLTSRFQQA LADAQSLAVG
RDHNIIEPVH VLAALLDQSG GSTRPLLSQA GVNVPLLRER LGEALDTLPK VSGQEGNLSI
GNDLNRLLNQ TDKLAQQHGD AFIASEWFVL AAADDASPLG VALRAAGGDK KKIEAAIDKL
RGGETVQSEN AEEQRQALEK YTIDLTARAE SGKLDPVIGR DEEIRRTIQV LQRRTKNNPV
LIGEPGVGKT AIVEGLAQRI INGEVPEGLR GKRVLSLDMG ALIAGAKFRG EFEERLKAVL
SDLSKTEGQI ILFIDELHTM VGAGKADGAM DAGNMLKPAL ARGELHCIGA TTLDEYRKYI
EKDAALERRF QKVFVGEPTV EDTIAILRGL KERYAVHHGV EITDPAIVAA ATLSNRYITD
RQLPDKAIDL MDEAASRIRM EIDSKPEELD RLERRLIQLK IQREMLKKEK DDASRQRLAD
LESDIDKLER EFYDLNELWK SEKAALQGTT KIKEQIEHAK LELEAAQRRQ DYAKMSEIQY
GVLPQLEKQM LIANEVEHHD FKLVQDRVTA EEIAEVVSRW TGIPVNKMLE GERDKLLRME
DELHHRVVGQ NEAIKVVSDA VRRSRAGLSD PNRPSGSFLF LGPTGVGKTE LCKALADFLF
DSTEAMIRID MSEFMEKHAV ARLIGAPPGY VGYEEGGYLT EAVRRRPYAL ILLDEVEKAH
ADVFNILLQV LDDGRLTDGQ GRTVDFRNTV IVMTSNLGSH QIQELSGDGS AEAYTQMKAA
VMGVVQAHFR PEFINRLDDI VVFHPLDKAQ IKSIARIQLQ GLEKRLAERG LRLDLDDAAL
ELLGNVGFDP VYGARPLKRA IQAQVENPLA QQILSGQYAS GETVRVRAQG GRLEFGKA
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