| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02096 |
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| Symbol | |
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| ID | 6307220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3807237 |
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| End bp | 3809207 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642640965 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_001914813 |
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| Protein GI | 188577884 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.861869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACG ACGCGCAGCC GCGCCAGCTC ACCTTCCGCG CCGTCGTGCT GGCCATCGTG
CTGGCGGTGG TGCTTTCGGC TGCCAACGCC TATCTCGGCC TGTTCGCGGG CCTGACCATC
GCCACTGCCA TCCCGGCAGC CGTGGTGTCG ATGGGCGTGC TGCGCCTGCT GGGCGGCGGC
ACCATCCTGG AAAACAACAT CGTGCAGACC GGCGCTTCGG CCGGGTCGTC GATCGCCGCC
GGTGTGATCT TCACCATTCC GGCGCTGGTG ATCATGGGCT ACTGGCCGGA CTTCAGGTAC
TGGTGGGTGC TGGGCATTGC CGGCATGGGC GGGCTGCTGG GCGTGCTGTT CTCGGTACCG
TTGCGGCGCT CGATGATCGT CGAAGACCCG CTGCCGTTCC CCGAAGGCAA GGCGGCGGCC
GAAGTGCTCA AGGCCGGCGA AAATCCCGGC CCGGGCCTGA AGATCCTGGC CGCTTCCGGC
GCCATCGGCG CGCTGGTCAA GCTGGCTGCG GCCAGCGGTT TGCGCGTGAT CCCGGATACC
TGGGCGCAGG CCACCTACCT GGGCAGCAGT CGTCTGGTGG GGTATATCGG CACCAACCTG
TCGCCGGCGC TGCTGGGCGT GGGTTACATC GTCGGTTTGA ACGTGGGCAT CGTGGTGCTG
TCCGGCTCGA TCCTGTCCTG GCACATCGCC ATCCCGCTAT ACCAGCAGTT CTTCATGGGC
TCGGACCCGG CCCTGGCGCA GAGCCTGGTC GGTGCGTCGG CTGCCGATGC GGCGTTCGGC
ATCTGGGGCG CGAAGATCCG CTACCTCGGC GTCGGCGCAA TGTTGATCGG TGGCGTGTGG
ACCTTGTTCT CGCTGCGCAC ATCGCTGTTT TCCGGGGTCA AGAGCGGTTT TGCCGCCGCG
CGCAAGAGCG GTGGCGGTGT GGTTGCAGAG ACCGAGCGCG ATCTGCCGAT GAAGTGGATG
CTGGTGGCGC TGGTGCTGTG CACCTTGCCG CTGCTGGGCC TGTATCAGGC CATCGTGCAG
CAATGGCATG TGTCGATCCC GATGACCATC ATCATGATCG TGGCCGGCTT CCTGTTCGTG
TCGGTGTCGG GCTATCTGGC CGGCTTGATC GGCTCGTCCA ATAACCCGGT GTCGGGCATC
ACCATCTCCA CCATCCTGTT CGCCTCGGCG GTGCTGGTAT TGCTGCTCGG CAAGAGCGGC
CTGGTGCCGG TGGGCATCGG TGCCGCGCCG TTGGGTGCAG TGGCGGCCAT CATGATCGGC
GCGGTGGTGT GCTGTGCGGC GGCGGTGGGC GGCGATAACC TGCAGGATCT CAAGGCCGGT
TATCTGGTTG GTGCCACACC GTGGAAGCAG CAGCTGATGC TCGGCATCGG TGCGTTCTCG
TGCGCCTTGA TCATGGCGCC AGTGCTGAAT CTGCTGGCCC AGGCCTACGG CATTGGCCCG
GCAACGCCAC AGCATCCCAA CTCGCTGGGT GCGCCGCAGG CCACGCTGAT GGCCTCGGTG
GCCAAGGGCC TGTTCGGCGG CCAGCTGCCG TGGAGCATGA TCGCGATCGG TGCCGGCGTG
GGTGCGGCCA TCATCGCGCT GGACGAATGG TTGAAGGCCA CCGGCAAGCG CTTCCGCGTG
CCGGTGCTGG CCGCGGCCAT CGGTATCTAT CTGCCGCTGG AACTGATGGT GCCGATCTTC
ATCGGTGGCT TGATCGCGCA TCTGGTGGAA CGCTTCCACG CCATTCGCGC CGATGACGAA
GACGGCCGCG ACCGCGTGCA TCGCCCGGGC GTGCTGTTCG CTGCTGGCCT GATCACCGGC
GAGGCGTTGA TGGGCATCGC CATTGCGGTG CCGATCGTGC TGTCAAGCCG CGCCGACGTA
CTGGCATTGC CGGCCGTGCT GCAACTCAGT CAGTGGTTCG GCCTGGCCAT TCTGGCCCTG
GTCGGCTGGC TGCTGTATCG CGTCGGCAAG CGCGGCGAAC AGGCTGCCTG A
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| Protein sequence | MRHDAQPRQL TFRAVVLAIV LAVVLSAANA YLGLFAGLTI ATAIPAAVVS MGVLRLLGGG
TILENNIVQT GASAGSSIAA GVIFTIPALV IMGYWPDFRY WWVLGIAGMG GLLGVLFSVP
LRRSMIVEDP LPFPEGKAAA EVLKAGENPG PGLKILAASG AIGALVKLAA ASGLRVIPDT
WAQATYLGSS RLVGYIGTNL SPALLGVGYI VGLNVGIVVL SGSILSWHIA IPLYQQFFMG
SDPALAQSLV GASAADAAFG IWGAKIRYLG VGAMLIGGVW TLFSLRTSLF SGVKSGFAAA
RKSGGGVVAE TERDLPMKWM LVALVLCTLP LLGLYQAIVQ QWHVSIPMTI IMIVAGFLFV
SVSGYLAGLI GSSNNPVSGI TISTILFASA VLVLLLGKSG LVPVGIGAAP LGAVAAIMIG
AVVCCAAAVG GDNLQDLKAG YLVGATPWKQ QLMLGIGAFS CALIMAPVLN LLAQAYGIGP
ATPQHPNSLG APQATLMASV AKGLFGGQLP WSMIAIGAGV GAAIIALDEW LKATGKRFRV
PVLAAAIGIY LPLELMVPIF IGGLIAHLVE RFHAIRADDE DGRDRVHRPG VLFAAGLITG
EALMGIAIAV PIVLSSRADV LALPAVLQLS QWFGLAILAL VGWLLYRVGK RGEQAA
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