| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02066 |
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| Symbol | hsdR |
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| ID | 6307250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3836647 |
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| End bp | 3840120 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640994 |
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| Product | type I restriction enzyme EcoKI subunit R |
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| Protein accession | YP_001914842 |
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| Protein GI | 188577913 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGTCG ACAGCAACTT TTCCTTCCTG CAGGAACACG ACCCGGTCTT CTTCAAACTG
GCTTCGATGG CCGAGCAGGT CTTTGCCAGC GATCCCAACA CCACGCTGAT CAAACTCCGG
CAGTTCGCCG AAGCGCTTGC CCAGGATCTT GCTGGGCGCG CCGGCATTCT CCACGACCAG
CGGACAACCC AGGCGGATCT GATCTACCAG CTCGCACGCG AGCTGCGCCT GGACCGGCGG
ATCCAGGAGC TGTTCCACGT GCTGCGGGTC GAGGGCAACA AGGCGACCCA CGGCTTCACC
ACGCAACACC GCGAAGCGAT GGATGGCCTG AAGGTCGCCC GCGACCTGGC GGTCTGGTAC
CACCGGGCCT TCGGCAGGAA CGCCGCCGAC TTCAAGGCCG GGGCTTTCGT GCCCCCGAAG
GATCCAGCCG CGCCGTTGCG TGACGTGCAG GCCGAGGTCC ATCGCCTGAA AGCGGAGCTG
GATACCGCCC GCCAGCAGCA CGACCAGAGC CAGGCGCTCG CCGAACTCAA GAGCAGCGAA
GCCAAACTCA ACGCCGAGCT CGCCGAAGCG ATGGACATCG AAGCGCGTGC GCAGTCGGCG
CTGGCAGTCC AACGCGAACA GGAACTGCAC CGGCTGCGCC AGGACTTCGA ACACCGCATC
GCCAGCCTGC AACAGCCGGA CACCGCCCGC CAGGCCGCCA CCCAACAGGT CGCCGACGCC
ACCCAGCAGG CCAGCAACAC CTTCGACCTC AGCGAAGACC TCACCCGCAT CCTGATCGAC
CAACAGCTGC GCGAGGCCGG CTGGGAAGCC GACTCGCTCG ACCTCACCCA CGCCAAGGGC
ACCCGCCCGG AAAAAGGTCG CAATCTCGCC ATCGCCGAGT GGCCCACCAA GGTGCCGCGC
GCCAACGCCG ACTATGTGCT GTTCGCCGGC CTCACGCCGG TCGCCGTCGT CGAGGCCAAG
CGCAAGCAGA TCAACATCGC CGACCGGATT CCCCAGGCCG AGCGCTACGC GCGCGACTTT
GTGATGCGTG GCGAGCTGGC CCCCGCCTAC CCGGCCACCA CCGCGATCGC AGGCTGGGCC
GACGGCCAGG GCGGCCATTT CCAGGTGCCG CTGGCATTCG CCTGCAATGG CCGTCCTTTC
GTGAAGCAGC TGGCCGAGCA ATCGGGCATC TGGTTCCGCG ACCTGCGCTC ACCGGCCAAT
CTGCGGCGCC CGCTGCAGAA GTTCCACACG CCCGAGGACA TCGCCGATCT GCTCACCCGC
GATCGCGACC AGGCCGAGCG CGACCTGGCC CAGGAAGGCA TGGCCTACCT CAACCTGCGC
GACTACCAGC AGCGCGCGAT CCAGGCAGTG GAAGGCGCGC TGGCATCGGG CGCACGCAAC
TGCCTGCTGG CGATGGCGAC CGGCACCGGC AAGACACGCA CGATGATTGG CCTGATCTAC
CGCCTGCTCA AGGCCGAGCG CTTCCACCGG ATTCTGTTCC TGGTCGACCG CTCCGCGCTC
GGCACCCAGG CCACCGAGAC GATGCAGGAC ATGCAGCTGG AGCAGAACCA GACGCTGGCG
CAGATCTACA ACCTCGATGG CCTGGACGAC ACCCGCACCG CCGATGAGAC CCGCGTGCAG
GTCGCCACGG TGCAGGCCAT GGTCCGGCGC ATTTTCCAGT CCGATGACCC GCCACCGATC
GGCACCTTCG ACTGCATCGT CGTCGACGAG GCCCACCGCG GTTACACGCT CGACCAGGAA
ATGACCGACG GCGAGCTGGC CGTGCGCGAC CACGCGCAAT ACCTGTCGCA ATACCGCCGC
GTGCTCGACT ACTTCGATGC CTGCCGTATC GGCCTGACCG CCACGCCGGC CAAGCACACC
ACCGAAATCT TCGGCAAGCC GATCTACACC TACAGCTACC GCGAAGCCGT GGCAGATGAC
TGGCTGATCG ACCACGAGCC GCCCATCCGC TACACCACCG CGCTCGGCAA GAACGGCATC
CACTTCGACC GCGGCGAGCG CGTCAGCGTC ATCAACACGC AGACCGGCGA CGTCGATACC
GCAGACCTGG AAGACGAACT CGACTTCAAT ATCGAGTCGT TCAACCGGCG TGTGATCACC
GCAAACTTCG ACCGGGTTGT CTGCGAACAG CTTGCCATCG AACTGGACCC GGACGGCGAG
GAAAAGACCC TGATCTTCTG CGTCAATCAG CCCCACGCCG AACGCGTCAA GCACCAGCTG
GACGAGGCCT TCAAACAGGT CCATGGCAAT TACTACAACC AGGCCAGCGT CGCGGTGATC
ACCGGCAAAA GCGACAAGGT CGACCAGCTG ATCCGCAACT ACAAGAACGA GCGCTTCCCC
ACGATCGCCA TCACCGTCGA CCTGCTGACC ACCGGCATCG ATGTGCCGCG TATCGCCAAC
CTGGTGTTCA TGCGCCGGGT CCGCTCGCGC ATCCTCTACG AACAGATGAA GGGCCGCGCC
ACCCGCCGCT GCGACGACAT CGGCAAGACC GTGTTCCGCA TCTTCGATCC GGTCGATCTG
TACGCCGCGC TCGAAGATGT CGACACCATG CGCCCACTGG TCAAGGACCC CAACATCAGC
ATCGAGCAGC TGGTTCACGA GCTCGGCCAG CAGCGCAGTT ACGATGCCCC CGGCAGCAAC
GGCGGCAGCC ATGCCGACGA CGCACTCGAC CAGTTGAGCC AGCGCATCAT GCGCGTGCTG
CGCAAGGCCC AGCATCGCGC CGAGCAGCGC CCGGATTTGC GCGACAAGCT CAGCGAGTTG
GAAACCGCCT GGGGCGTAGC GCCCGCCGTG CTGCATACCC ACCTGCACAA GCTCGGCGCG
CGCAATGCCG CCAGCTTCCT TCGCGAACAC CCGCGCCTGG TGGAGCAACT GGCGGACGTG
GGCGTGCTGC TGGGCACCGA CCGCTACCCG GTCATTTCCG AACACACTGA CACCCTGCTC
GAACGCGCGC AGAACTACGG CGTCAACGAA GCCCCGGCCG ATTACCTGGA CAGCTTCAAC
GCCTTCATCC GCGAGCAGAT CAACCAGTCC GCCGCGCTCA GCGTCATCGT CAACCGCCCC
CGTGACCTCA CCCGCGCCCA GCTGCGCGAG GTACGCCTGC TGCTCGACCA GCACGGCTAC
AGCGAGGCCC ACCTGCGTGG AGCCTGGCGC GACAGCACCC AGCAGGAGGT CGCCGCCAGC
ATCATCGGCT ACATCCGCCG TGCCGCGCTG GGCGAGGCAT TGGTGCCGTT CGAGCAGCGT
GTCGACAAGG CCATGCAGGG CATCTATGCC CAGCGCAGCT GGACGCCGGT GCAGCGGCGC
TGGCTCAAGC GGCTGGCCCA GCAGCTGATA CACGAGGTGG TACTGGACCG CGACACCGTG
CAACGCAACT TCAGCGGCGA CGGCGGTGCC CTGCAATTGG ACCGCCTGCT CGATGGCCGG
CTGGACCAGA TCCTGGGCGA TCTGGGCGAG CATCTGTGGG ATCAGACCGG CTGA
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| Protein sequence | MTVDSNFSFL QEHDPVFFKL ASMAEQVFAS DPNTTLIKLR QFAEALAQDL AGRAGILHDQ
RTTQADLIYQ LARELRLDRR IQELFHVLRV EGNKATHGFT TQHREAMDGL KVARDLAVWY
HRAFGRNAAD FKAGAFVPPK DPAAPLRDVQ AEVHRLKAEL DTARQQHDQS QALAELKSSE
AKLNAELAEA MDIEARAQSA LAVQREQELH RLRQDFEHRI ASLQQPDTAR QAATQQVADA
TQQASNTFDL SEDLTRILID QQLREAGWEA DSLDLTHAKG TRPEKGRNLA IAEWPTKVPR
ANADYVLFAG LTPVAVVEAK RKQINIADRI PQAERYARDF VMRGELAPAY PATTAIAGWA
DGQGGHFQVP LAFACNGRPF VKQLAEQSGI WFRDLRSPAN LRRPLQKFHT PEDIADLLTR
DRDQAERDLA QEGMAYLNLR DYQQRAIQAV EGALASGARN CLLAMATGTG KTRTMIGLIY
RLLKAERFHR ILFLVDRSAL GTQATETMQD MQLEQNQTLA QIYNLDGLDD TRTADETRVQ
VATVQAMVRR IFQSDDPPPI GTFDCIVVDE AHRGYTLDQE MTDGELAVRD HAQYLSQYRR
VLDYFDACRI GLTATPAKHT TEIFGKPIYT YSYREAVADD WLIDHEPPIR YTTALGKNGI
HFDRGERVSV INTQTGDVDT ADLEDELDFN IESFNRRVIT ANFDRVVCEQ LAIELDPDGE
EKTLIFCVNQ PHAERVKHQL DEAFKQVHGN YYNQASVAVI TGKSDKVDQL IRNYKNERFP
TIAITVDLLT TGIDVPRIAN LVFMRRVRSR ILYEQMKGRA TRRCDDIGKT VFRIFDPVDL
YAALEDVDTM RPLVKDPNIS IEQLVHELGQ QRSYDAPGSN GGSHADDALD QLSQRIMRVL
RKAQHRAEQR PDLRDKLSEL ETAWGVAPAV LHTHLHKLGA RNAASFLREH PRLVEQLADV
GVLLGTDRYP VISEHTDTLL ERAQNYGVNE APADYLDSFN AFIREQINQS AALSVIVNRP
RDLTRAQLRE VRLLLDQHGY SEAHLRGAWR DSTQQEVAAS IIGYIRRAAL GEALVPFEQR
VDKAMQGIYA QRSWTPVQRR WLKRLAQQLI HEVVLDRDTV QRNFSGDGGA LQLDRLLDGR
LDQILGDLGE HLWDQTG
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