Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02058 |
Symbol | |
ID | 6307258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3847757 |
End bp | 3850255 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642641002 |
Product | hypothetical protein |
Protein accession | YP_001914850 |
Protein GI | 188577921 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0224791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACGGGC CGCGCCGCAT TACGGTCAAG GATGCGGCAC GCGCCACCAA GGTATGGCTG GGGTTCTCGG ATGTGACGTG GACAGCGGCC GTGCTGCACA GGCACGCCGA TGCCGCCTAC CGACAAGCGC ATATGCGCTG CCTGGACATC GCCCAATGGC GCGCAGGCGG GCAGCTGCAA CATGCCAGCG ACTTCGCCGA GCTTGCCAGC CGCGTGGCGG AGTACGCGAC CACGCCGGAG CCGCTGCTTG CGCAGACCCA GGCCTATGTC AAAACGCTGC TGCCGGTGCC GTTCAAGACC GTCGGCGAGC TGCGCGGTGC CGATGCCTTG GCAACGCGCG CCCGCGAGTC GAGTTCACGG CTGCTGCAGC AGCTGCTGCC GGTGGCGGCC GGCGGCGTTG CCGGCCACAA GGGCCGGGTG ACCTCGGCAA CCTGGGCGTT CTCCACCCAA CCCTTCTTCG CCGACGGCAA CGATGCCGCC GCCATGCTGA CCTGGGCCGC GCAGACAGCC GCACCGTTGC GGCCGGCCTT GGTCGCGTTG GACGATCCGG CCGGGGTGGC CATGGAGCTC AACGGCCTGG CCCTGCAGCG CAGCATGGAG TTCAGCGAGA ACCCGCAGCG CAAGTGGAAG CATGAAACGG CGGTGTTGAT CGATGCGCTG CAGGAGGCGG TCAAGCACGG CGCGGTCGAG GATGAAGTGC ATGCGCAGAT CGCCGCCTCG CGCACCGCCG AAGGCATCGC GAACATCGAC GACGCCCAGG ATCTTCCCGA TGCGACCTCC TACCTGTGGA CCACCATGAC GCAAGGATCG GATGTCGCCT TGCGTGAGCA GAGCGCACGC GACCGGCAAC GCGAGCAGGC ACGTGCCGAA GAGGATGCAA GGATCCGCGA GCAAGCCGAC GCGAATGCCT CCGCACTGGG GCGGGAAGCG TGGAAGACAT ACACCAAGTA CTTCGATGAG CCCGCGCAGC GCCGCGTGGT CGATCAGGAG TATCCCCGGC AGCTGGAGCA CTTCGGGCGC GAGGTGCTGG CCAGGCTGGA CCCGCCCTAC CTCGCCTGGC TCAAGAGTCC CTCGTTGACG ACCTACCTGA CCCACACCTT CGACGAGCAC GATCTCGACA GCGGTGCCTC CTATACGGCG TTGGCGACGC AGCTGCTGCA CCATGCCAGC GGTCGTGGCG CGGTGTTCGA CTACCTGTGC CAGAGCATCC AGCAGGCGCC GACCGCGCCC GAGGCCTGGG TGGCGCGGGC GTTGGCGCTC AATCACGCGC CGCTGATCCA GGCGAGCTGG GAGGAGGCGG CCAGGAAGGG CAGCGAGCGC GAGCCATTCC TGCCGGAGTT CGTGGAGAAG TTCCACGACA AGTTCAAGGA TGTGCTGGTG GCCGGTGGCA AGGGGGAATT GAACCGGCCG ATGGTCGATG CGGTGGCGCG CTTCATGTAC CAGCTGACCG GCCCGCTGGT GCGCGAGCTG GGGTCCGCGC TGGATCACGG CATGGCGTTT GCGGCCCTGC CGCTGCCGTC GAAATGGCAG CTGGGCTTGT TGGGCGCGGT GGCGCGCGCG GAGACGCCGA CCCTGCGGAT GGTGGATCTG CGCGGCACGC GCAGTTTCAG CGAAGCGACC AAGCTGCTGG CCAATCTGGT GTCCTCGCTG GGCGCCGGGC CGGCGGGCGC GGCGCGCGGC GCGGTGCGGC CGACGCTGCG GCCGGTGATG GACACGGCCG AGCGCTATCC GTTCCGGGCG GTGATGCTGG TAGACGAGGC CAAGGTCGCG CAGCTGGAAG GCAGCGGCGG TGCGGCGCTG AAGGCCGGCA TGGCCGAGGC GCTGAGCGCC CACCAATTCG ATGACGTGAT GCAGGAATCG GTGGGCAAGC TGGCCAGTCT GGAAGTGAAG GTGGCGGTGG TGCAGGCGAT CCTGTCGTCG ATCACGCTGT ATCTGTCGTA CGGCAAACTG ATGAAGGCCG AGCAGGACAA GGTGTGGAGC GAACGGGTCA ACGTGGCCGG CGGGGTGATC GGATTGGTGG GGGGATTGAC CGAAGCCACC GGTAATGTGC TGGAGAAGAC CCCCTGGGGC CAGACCCGCC TGAGCTGGCA GTTCCGGTTC CAGGCGGTGG TGATCGAGAG CCGTGCGGGA TGGTTTACCG GCATGGGCAA GCTGATGGGC GTGGTGGGTG GGGTGATTGG GGGGATTTTG GCGATTAAGG ATGGCTGGCA AACTGTTGGT AAACACCCTT TATTGGGCAC TGTTATACTT ATTCTGGGTG CCGCATCAAT CGGCGCAGCG ATTATGTTGG TTTTTACTGC AACAGCTGGT GTTGGATTGA TTTTGGGGAT TCTTATTGCC ATTCTTATGG CTGTTGTTTA TTGGCTGAAG CCAAATGCAA TACAGGATTG GTTGGTAGAC ACGCAGTATG GCCTTATCGA TCAAGGAGGC GGTACGGTGT CTTCTTTCAA AGGCTTGGCT CAGCAGCAGA TTTCCCTTGA AGCACTTGCA AAAGGTTGA
|
Protein sequence | MDGPRRITVK DAARATKVWL GFSDVTWTAA VLHRHADAAY RQAHMRCLDI AQWRAGGQLQ HASDFAELAS RVAEYATTPE PLLAQTQAYV KTLLPVPFKT VGELRGADAL ATRARESSSR LLQQLLPVAA GGVAGHKGRV TSATWAFSTQ PFFADGNDAA AMLTWAAQTA APLRPALVAL DDPAGVAMEL NGLALQRSME FSENPQRKWK HETAVLIDAL QEAVKHGAVE DEVHAQIAAS RTAEGIANID DAQDLPDATS YLWTTMTQGS DVALREQSAR DRQREQARAE EDARIREQAD ANASALGREA WKTYTKYFDE PAQRRVVDQE YPRQLEHFGR EVLARLDPPY LAWLKSPSLT TYLTHTFDEH DLDSGASYTA LATQLLHHAS GRGAVFDYLC QSIQQAPTAP EAWVARALAL NHAPLIQASW EEAARKGSER EPFLPEFVEK FHDKFKDVLV AGGKGELNRP MVDAVARFMY QLTGPLVREL GSALDHGMAF AALPLPSKWQ LGLLGAVARA ETPTLRMVDL RGTRSFSEAT KLLANLVSSL GAGPAGAARG AVRPTLRPVM DTAERYPFRA VMLVDEAKVA QLEGSGGAAL KAGMAEALSA HQFDDVMQES VGKLASLEVK VAVVQAILSS ITLYLSYGKL MKAEQDKVWS ERVNVAGGVI GLVGGLTEAT GNVLEKTPWG QTRLSWQFRF QAVVIESRAG WFTGMGKLMG VVGGVIGGIL AIKDGWQTVG KHPLLGTVIL ILGAASIGAA IMLVFTATAG VGLILGILIA ILMAVVYWLK PNAIQDWLVD TQYGLIDQGG GTVSSFKGLA QQQISLEALA KG
|
| |