| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02054 |
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| Symbol | |
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| ID | 6307262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3855024 |
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| End bp | 3857573 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642641006 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001914854 |
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| Protein GI | 188577925 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTGG AACTGCTCAC CGCCGAATCG CACACCGCGC TGCGCCCGTT CCACGGCCAT
GTCACCGCGT TCGAGCGGCT TGGCAGCAAC GGCGGCCTGG CGCGCTACCG GCTGGTGGTG
GAGCCGTGGC TGGCGCTGCT GGCCCAGCGC GTGGACAGCT ACGTGTTCCA GGACATGAGC
GTGGTGGAGA TCGCCGAGAG CGTATTCGCC GACTACGCCG GGCAAGGCGC GCTGGCGCCG
GCGTGGCGTT GGGAGCTGTC CGACCGCAGC ACGTACGCCA GGCGCAGCCT GACCACGCAA
TACGAAGAGA CCGACTTCGC GTTCCTGAGC CGGCTGCTGG CCGAGGAAGG CATCGCCTAT
TGGTTCGAGC ACACCGGCGC AGCCGACAGC GCCACGCGCG GCACGCACAC GCTGGTGCTG
TCGGACCATA ACGCCGCCTT CGCCGACCTG GGCACGGTGC GCTACCACCG CACCGACGTC
ACCGAGCAGC AGGACAGCGT GCAGCAGTGG GTACAGGCAC ATCGCTGGCG CGCGACCAGT
CTGTCGCGGG CCAGCTGGGA CTACCGCAGC CGCAGCCTGC GCCTGGCCGG CGCCGAAGGC
ACGCCGCTGG GCGACATCGG TGCCGAGGAC GTGGACACCG CCGGCCCCTA CGGCTGGCAG
GACAGCACGC GCGGCCAGCG CCGCGCGCAG CAGCATCTGG ATGCGCAGCA GGTGACGGCG
CAGACCATCC AGGGCCAGGG GACCTGGCGG CAACTGGCGC CGGGCACGCG TTTCGGGCTG
CGCCAGCATG CGGTCGTGGC GGCCGATGCG GCGTTTCTGT GCCTGCAGGT GCGGCACCAG
GCGCGCAACA ACCTGGGCGC GGAGGTGTTC GACGCGCTGG AGCAGGCGCT GGGCGCGGTG
GCGGTGGCCG GCGCGCCGCT GCCGCCAGCG CTGGCAGGCC TGAGCGGCGG GTATGCGCCG
GCGCAGGATG AGGCGGCGGT AGAGTTCTAC CGCAACCAGT TCACCGCCAT ACCGGCCACC
GCGACCTACC GGCCGCAAAC CGAGGACGGC CACGGCGTGC GCCTGCATCC CAAGCCCACG
GTGGTCGGCA CGCTGAGCGC GATCGTGGTC AGCGACGGCG ACCCGGTGCA GTCCGACCGC
GACCACCGGA TCAAGGTGCA GTTCCCGTTC CAGCGCGGGG CCGACGCCAG CAGCGCGCTG
GCGCATCCGG GGGGCGAGGA CAACGCGCCG GGCAGCGCCT CGGCGTGGAC CTGGGTGCGG
GTGATGACGC CGTGGGCCGG GGACAACTGG GGCGGCGTGG TGCTGCCGCG CAAGGGCCAG
GAAGTGCTGG TGGGGTTCCT GGAAGGGGAC ATCGACCGGC CGGTGGTGAT CGGCAGCGTG
TACAACGGGC GCGGCCAGGA CGAGGCGGCG CACAACCAGG TCGGCGGCGG CGGGGCCGGG
GCCACCGGCA ATGCGCCGGC GTGGTTCCAG GGCAACGCGC ACGGTGCGGT GTTCACCGGG
TTCAAGAGCC AGGCGCTGGC GCAGAGCCAG GACGGCACCG GCGGCTACCA GCAGCTGCGG
CTGGACGACA CGCCCGGCCA GGGCCGCGCG CAGCTGTCGA CCACCCAGCA CGCCAGCAGC
TTGACCCTGG GCCACCTGAA GGGCGGCCAC GACAACCTGC GCGAAGGCGA GCGCGGGTAC
GGGGCGGACC TGTCCACGCA GGCCTACGGC GCGGTGCGCG CCGGCCAGGG CCTGCTGCTG
AGCAGCGAGC CGGGCAACAC CCAACTGGCC GCCACCGGCG CGCTGAGTCA ACTGCAGCAG
GGCAGCGACC TGCTCAAGCG CCTCAACGAC GCCGCCCGCA CCCAGCAGGC GGGCCTACCG
AGCGAACCGG AGTCCCTGCC GACCCAGGAC GGCCTGAAGA CCTTGCAGGA CCACCTGCAG
GCCACCCACA CCGGCAGCGC GGCCGGCGAG ATCGGCGGTG GCGCCGGCGA GGTGCCCGGC
TGGAGCGCCC CAGTGCTGCT GGGCAGCGGC CAGGCCGGCG TGATGAGCCT GACCCCGGCC
GATCAGGTGT GGGTGTCGGG CACCCAGACC GCGCTGCTGG CCGGCAGCGC ACTGAACTGG
CTGAGCCAGG GCCACCTGGT GCTGGCGGTG GCCGGCGGGC TGGTGCTGTA CACCCAGGGC
GGCGACCCGG TCGCCGGCAG CCCCAACCAG GAGCGCGGCA TCGCCCTGCA CGCCGCGCAA
GGCACGCTCA GCGCCCGCGC GCACAAGAAC ACCGCCACCC TGGCCGCCAA GACCCAGGTG
CGCATCGTCA GCACCACCGC CGACGTCCAG CTCACCGCGC CGACCAGGCA CCTGCTGGCC
ACCGCGGCCG GCGCCTACAT CAAGCTGGAC GGCGACGACA TCGAACTGGG CGCGCCGGGG
GTGGTCGCGT TCAAGGGCGG GCAGCAGGTG TTGACGGCGC CGCAGGGGGC ATCCATGAGC
CCCGTGACGC CATCCGCCAG CCACAAGCTG TGTGAATACA CCGCCCGCGC GGCAGATTTC
GCCGGTGCAG GGACGATGGG GGCCGCCTGA
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| Protein sequence | MLLELLTAES HTALRPFHGH VTAFERLGSN GGLARYRLVV EPWLALLAQR VDSYVFQDMS
VVEIAESVFA DYAGQGALAP AWRWELSDRS TYARRSLTTQ YEETDFAFLS RLLAEEGIAY
WFEHTGAADS ATRGTHTLVL SDHNAAFADL GTVRYHRTDV TEQQDSVQQW VQAHRWRATS
LSRASWDYRS RSLRLAGAEG TPLGDIGAED VDTAGPYGWQ DSTRGQRRAQ QHLDAQQVTA
QTIQGQGTWR QLAPGTRFGL RQHAVVAADA AFLCLQVRHQ ARNNLGAEVF DALEQALGAV
AVAGAPLPPA LAGLSGGYAP AQDEAAVEFY RNQFTAIPAT ATYRPQTEDG HGVRLHPKPT
VVGTLSAIVV SDGDPVQSDR DHRIKVQFPF QRGADASSAL AHPGGEDNAP GSASAWTWVR
VMTPWAGDNW GGVVLPRKGQ EVLVGFLEGD IDRPVVIGSV YNGRGQDEAA HNQVGGGGAG
ATGNAPAWFQ GNAHGAVFTG FKSQALAQSQ DGTGGYQQLR LDDTPGQGRA QLSTTQHASS
LTLGHLKGGH DNLREGERGY GADLSTQAYG AVRAGQGLLL SSEPGNTQLA ATGALSQLQQ
GSDLLKRLND AARTQQAGLP SEPESLPTQD GLKTLQDHLQ ATHTGSAAGE IGGGAGEVPG
WSAPVLLGSG QAGVMSLTPA DQVWVSGTQT ALLAGSALNW LSQGHLVLAV AGGLVLYTQG
GDPVAGSPNQ ERGIALHAAQ GTLSARAHKN TATLAAKTQV RIVSTTADVQ LTAPTRHLLA
TAAGAYIKLD GDDIELGAPG VVAFKGGQQV LTAPQGASMS PVTPSASHKL CEYTARAADF
AGAGTMGAA
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