| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02051 |
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| Symbol | clpV |
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| ID | 6307265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3858283 |
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| End bp | 3861015 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642641009 |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_001914857 |
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| Protein GI | 188577928 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCA ATCTCAAGAC CCTGATCAGC AAACTCGACG ACACCTGCCG GCAGGCGGCC
GAGCGCGCGG CCAATCTGTG CATGGCGCGC GGCAACTACG AAGTCGACCT GGAACATCTG
TTCCTGGCGC TGCTGGAGCA ACCGCAAAGC GATTTCGTGC TGATCGCGCG CCGCTGCGGC
ATTTCGCCGG AGACGCTGGA ACGTGATCTC AGCGAGGAGG TCGGCCGCTT CAAGGCCGGC
AATACGCGCA CGCCGGTATT TTCCCAGCAC CTGCCCACGC TGTTCGAGCA CGCCTGGCTG
ATCGCCTCGC TAGATTCGGA AACCACGCGC ATCCGCAGCG GTCATCTGCT GCTGGCGCTG
CTGACCGAGC CAGACCTGTC GCAGCTGGCC TACCGCGGTT CCAAGCAGTT CGTGAAGATC
AAGCTCGACG CGCTCAAGCA CGACTTCGCC CGCCTCACCG AAGGCTCGCA GGAAGCCGGG
CAAAGCCTGC GTTTCGCCGA TGCCGGCCAG GCCGACGTCG GCGGCGACCC GGTCGATGGC
CTCGCCGGCG TGCCGGACGG CAAGGGCGGC CTGACCAAGA CCCCGGCGCT GGACCAGTTC
ACCACCAACC TCGTCCAGCG CGCCCGTGAT GCGCAGATCG ACCCGGTGAT CGGCCGCGAC
GGCGAGATCC GCCAGGTGAT CGACATCCTG ATGCGGCGGC GCCAGAACAA TCCGATCCTC
ACCGGCGAAG CCGGCGTCGG CAAGACCGCG GTCGTCGAGG GGCTGGCCCG GCGCATCGCC
GAGAAGGACG TGCCGGACGT GTTGCAGGGG GTGGAACTGC ATGTGCTGGA CATGGGCTTG
CTGCAGGCCG GCGCCAGCGT CAAGGGCGAG TTCGAGAACC GGCTGAAGAA CGTCATCGAC
GAGGTCAAGA AGAGCCCGCA TCCGATCATC CTGTTCATCG ACGAGGCGCA CACGATGATC
GGTGCCGGCG GGACCGCCGG CCAGAACGAC GCGGCGAACC TGCTCAAGCC GGCGCTGGCG
CGCGGCGAGC TGCGCACCAT CGCGGCCACC ACCTGGAGCG AATACAAGAA GTACTTCGAG
AAGGACGCGG CGCTGGCACG GCGCTTCCAG GTGGTCAAGG TCGAGGAGCC GAGCGAGACG
CTGGCTGCGG CGATGCTGCG CGGCATGGTG CCGCTGATGG AGAAGCACTT CGGCATCCGG
GTGATGGACG AGGCGGTCAC CGAGGCGGTC CGCCTGTCGC ACCGCTACAT CAGCGGCCGC
CAGCTGCCGG ACAAGGCGGT CAGCGTGCTC GATACCGCCT GCGCCAAGGT CGCGCTCGGG
CAGAGCGCCA CCCCGGCGAT CATCGAAGAC ACGCGCAAGC ACCTGGACCG GCTGGCCGCG
GAGTTGGCCG CGTTGAACCG CGAGACGTCC GGCGGCGCCC GCCACCACGA CGCGCGCGTG
GCCGAGCTAC TGCAAGCGCA GGAAAGCGCA CGCAAGGTGC TGGCCGACAA CCAGACGCGG
CTGGTGCGCG AGCGCGAACT GGCCGAGCGC ATCGTCGCCC TGCGCGCGCA GCTGGAAGCG
GTGCCGGCGG CCGCCGAACC CGCGGCCGTC GCCGCCAAGC CGGCACGCGG CGCGGCGAAG
CAGGCCACCG CGGCGGCTTC GCCGCAGCAC GCGCAGCTGG ACGCGCTGCT CGCCGAGCTG
GGCGAGCTGC AGGGCGAAAC CCCGATGGTG CCGCTGCAGG TCGACGGCGG CGTGGTCGCC
GAGATCGTCT CGGCCTGGAC CGGGGTGCCG CTGGGGCGCA TGGTCAAGGA CGAGATCCGC
ACCGTGCGCA ACCTCGACAG CCTGCTGGGC GAGCGCGTCA TCGGCCAGGA CCATGCGCTG
GCCGCGATCG CCCAGCGCGT GCGCACCGCC ACCGCCAAGC TGGAAGACCC GAACAAGCCT
CGCGGCGTCT TCCTCTTCGT CGGCCCGTCC GGCGTCGGCA AGACCGAGAC CGCGCTGGCG
CTGGCCGACA TCCTGTACGG CGGCGAGCGC AAGCTGATCA CCATCAACAT GAGCGAGTAC
CAGGAAGCGC ACAGCGTGTC CGGGTTGAAG GGCTCTCCGC CTGGCTACGT CGGCTACGGC
GAGGGCGGCG TGCTGACCGA GGCGGTGCGG CGCAACCCGT ACAGTGTGGT GCTGCTGGAC
GAGGTGGAGA AAGCACACCC GGACGTGCTG GAGATGTTCT TCCAAGTGTT CGACAAGGGC
GTGATGGACG ATGCCGAAGG CCGCGAGATC GACTTCCGCA ACACCTTGAT CATCCTCACG
TCCAATGTCG GTTCCTCACA GATCATGCAG GCCTGCCTGA ACAAGCCGGC CGAGGAGATT
CCGGCCGCCG ACGCATTGGC CGAGGCGTTG CGCCCGATCC TGATGCGCAG CTTCAAGCCG
GCCTTTCTCG GCCGGCTGAA GGTGGTGCCG TATTACCCGA TCAGTGACGA CGTGCTGGCG
CAGATCATCG CGCTCAAGCT CGGCCGCATC CGCGACCGCG TGGCCACCAA CCACAAGGCC
GCCTTCCACT GGGACCAGAG CCTGGTGGAG GCGGTGTTGG CGCGCTGTAC GGAAGTGGAT
TCGGGTGCGC GCAACGTCGA CCACATTCTG AATGGCACGC TGTTGCCGGA AATCGCCGAG
AGCGTGCTCG CGGCGATGGC CGAAGGCGGC AACATCAACG CCATCAAGGT AGGCGCCGGC
AAGAACGGCG CATTCAAATA CAAGTTATCC TGA
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| Protein sequence | MSINLKTLIS KLDDTCRQAA ERAANLCMAR GNYEVDLEHL FLALLEQPQS DFVLIARRCG
ISPETLERDL SEEVGRFKAG NTRTPVFSQH LPTLFEHAWL IASLDSETTR IRSGHLLLAL
LTEPDLSQLA YRGSKQFVKI KLDALKHDFA RLTEGSQEAG QSLRFADAGQ ADVGGDPVDG
LAGVPDGKGG LTKTPALDQF TTNLVQRARD AQIDPVIGRD GEIRQVIDIL MRRRQNNPIL
TGEAGVGKTA VVEGLARRIA EKDVPDVLQG VELHVLDMGL LQAGASVKGE FENRLKNVID
EVKKSPHPII LFIDEAHTMI GAGGTAGQND AANLLKPALA RGELRTIAAT TWSEYKKYFE
KDAALARRFQ VVKVEEPSET LAAAMLRGMV PLMEKHFGIR VMDEAVTEAV RLSHRYISGR
QLPDKAVSVL DTACAKVALG QSATPAIIED TRKHLDRLAA ELAALNRETS GGARHHDARV
AELLQAQESA RKVLADNQTR LVRERELAER IVALRAQLEA VPAAAEPAAV AAKPARGAAK
QATAAASPQH AQLDALLAEL GELQGETPMV PLQVDGGVVA EIVSAWTGVP LGRMVKDEIR
TVRNLDSLLG ERVIGQDHAL AAIAQRVRTA TAKLEDPNKP RGVFLFVGPS GVGKTETALA
LADILYGGER KLITINMSEY QEAHSVSGLK GSPPGYVGYG EGGVLTEAVR RNPYSVVLLD
EVEKAHPDVL EMFFQVFDKG VMDDAEGREI DFRNTLIILT SNVGSSQIMQ ACLNKPAEEI
PAADALAEAL RPILMRSFKP AFLGRLKVVP YYPISDDVLA QIIALKLGRI RDRVATNHKA
AFHWDQSLVE AVLARCTEVD SGARNVDHIL NGTLLPEIAE SVLAAMAEGG NINAIKVGAG
KNGAFKYKLS
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