Gene PXO_02045 details

Gene Information

• Locus tag: PXO_02045
• Symbol: evpA
• ID: 6307272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 3866769
• End bp: 3867269
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642641016
• Product: EvpA
• Protein accession: YP_001914864
• Protein GI: 188577935
• COG category: [S] Function unknown
• COG ID: [COG3516] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03358] type VI secretion protein, VC_A0107 family

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.792135
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGA AGGAAAGCAT CCAGAAACGT CTGCAGAAGA TTCGGCCGCC GCGCGTGCAG 
CTGACCTACG ACGTGGAAAA GGGTGACGCG ATCGAACAGA AGGAGCTGCC GTTCGTGGTA 
GGCGTGCTTG GGGATTTCAG CGGCAATCCC GAACAGCCCC TGGCCAAGGT CAAGGACCGC 
AAATTCGTCA ACGTCGACCT CGACAACTTC GACGAGGTGA TGGAGGGAAT GGCGCCGCGC 
GCGGTTTACC GTGTGCCGAA CAAGATCAGC GATGCCGGCG GCGAGTTCCG CGTCGAACTC 
AAGTTCAAGT CGATCGACGA CTTCCGTCCG GAGGCTGTGG TCGATCAGGT CGAACCGCTG 
CGCAAGCTGC TGGAATCGCG CACCAAGCTG GCAGACCTGC GCAACAAGCT GGCCGGCAAC 
GAGAAGCTCG AAGACCTGCT AACGGACGTG TTGAACAACA CCGAACAGCT GAAGAAGCTG 
GGTCGGGAAA AGGAGAAGTA A 

 

Protein sequence

MAKKESIQKR LQKIRPPRVQ LTYDVEKGDA IEQKELPFVV GVLGDFSGNP EQPLAKVKDR 
KFVNVDLDNF DEVMEGMAPR AVYRVPNKIS DAGGEFRVEL KFKSIDDFRP EAVVDQVEPL 
RKLLESRTKL ADLRNKLAGN EKLEDLLTDV LNNTEQLKKL GREKEK