| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02039 |
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| Symbol | |
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| ID | 6307278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3873652 |
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| End bp | 3876546 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642641022 |
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| Product | EF hand domain protein |
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| Protein accession | YP_001914870 |
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| Protein GI | 188577941 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.115818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CCGAGCAGAA GAAACTGGCG AAGATCAGCA AATTAGTCCA TCCGTTCCAG
AAAAGCGCAA AGGCAGGCAA GGCCGGCGCC AAGCCGACCG ACATCGACGA TCCGCAGGTC
TATTTCGATG CGCTTTCCAA CGCACAGGAC GGGTTCTACC CCATCGGTGC CAACGGGCAA
TGGCACGGCG GCATCCATTT CGATACGCAA ACCGGCAACA CCCTGGCGCA GGAAGACGGC
ATCCGCTGCA TCGGCGATGG CGAGGTCGTG GCGTACCAGA TCGATGCGAA GTACCCCAGC
ATCGAGTACA GCGCCGGCAA GGCCACCTAC TCACGCGGCT TCGTGCTGGT CCGCCACCGC
CTGGAGCTGC CGCCTGCGCC CAAGCAGACC ACGCAGCCTG CCCCTGCTGG ACCGAGCGCG
GCCAACACGG CACCGGCTAC GCCACAGCCG GTAGCCCAGC CTGCGGCAAC ACTCGATCAG
AAGGCGCAAG AGCCTTCGCT GATCTTCTAC AGCGTCTATC TCCACCTGCT CGACTGGGCC
GGCTACCAAG CCGATCCGAA GAAGCCGCGC CCGGCGTTCT GGAAGAGCGT GGCCTATATG
GTCGGCGACA AGGCCAAGGA CAGCGACAGA GTCTCTAACC CTTCCATTCC GGAAGGAGGC
GTAGGCCTTA ACCTGCGCGA CGCGCAGCAT CAGAAGGTCG GCTATGCGCC ACGCGGCGCC
AAGCTGCGGC TTGGCGCCGA AAATCCCAAC AAAAAGGGCT ATTTCGTCAT CTCCGAGGTC
GTCAGCGGGC AGACCGTTCC TGCCGACGCA AAAGGCCTGT ATGCCTACAA GGCAGAGCTG
ACCGCCGCCG GCGCCGAGCC CGACCGCCAG GACGCGGTCT ATGTGTTGCC AACCCCCGCC
CCGATCAAAG CCGGCGACTT GATCGGCTAT CTCGGTCACT ACCAGCGCTT TGCCGATCTC
ACGCCATTGG CGGCAGCCGG CCCCGCGCAG AATGGCGTGC GGCCACTGAT CCAGTTGGAC
GTATTCACCG CAGAAGATCT CAAGACCTTC ATCGCCAAGA GCCGTGAGCG GGCGAAGCTG
CTTGATGCCA AGCAAAAGAC CCTGCTCAAG ATCGACGTGG GCGCCAAGCT TGTGCTGCCA
AGCGAACCGG ACCAGCAGAT CGGCGCCGAG GAGGCTGCCG CCGTGGTCCC CGGCGGCAAG
GTCGGAGCCT GGGTTCAGGT GCGCAAAGGC ACCTTGCAGA TCATGGACAA GGACAGCCTG
AGCGGCTTCA ACAGCACCAC CCACACCTAC GGCGGCGGCC AGATCCTGCA TCGCGTGCTC
GGTGCCAGCG ATAGCGACAG CATCACCGAA GCGGCCTACA ACGCGCTGAA GACCAAGGAA
GAAAAAGACA AGTACCCGCG CCGCCAGGTA CTCGTTCCCA GCGGCGCGCC GGTGTGGGTG
GACAAGGCGA TGATGGGCGC CGACGCCAGC GTCGCCGACC GCTCGCTCAA GGCGTGGAGC
ACGTTCCCGC TACAGGCCAG CCAGGCCAAC GGACCGGAGG CGGGCTTCAT CCGCGTCGCC
GCCATCAAGA CACTGAAAAA GGTCGCGACC GAACCGGACG GCACCCGCTG GTGGGAAGTG
GATGTGGGCA AGATCGACGG CAGCAGCGCC GTGGGCTGGG CCAGGGAGAA GGACCATGCC
AAGGTCACCC GCTGCTCGCC GTGGGAGTGG CCGGGTTTCG AGTTCATCGA AGCCGACGGC
ACTACGCCGG AAGCGCTGTA CGCACGCCAC GTGGTCGCCA CCAAGCAAGC CAAGCCTGAC
GAGCAGGCCG CTTTGGAAGC CAAGGCCGCA CAAGCCAATG GAGGCCCGCT GTTCTCGCGC
GTATGCGACG CCATCGACCT GGACGACGAC CGTCATCTCA CCCCCGCAGA ACTGCGCAAG
GCCCTGAAAC AGCCCTGGTT GGCGGAGGCG ATTTCCCGCC TGGTCTTCCA TCACACAAGC
GAATGGGGAA CGCCGCGTGC GCAATGGAAC GCGATCGACG GCGATATCCC AGAATCGCGC
AAGGCGGATT GGGAGAAGGA AAAGGATCGG ATTGAAAGCC TGCAGTGGTG GAGCGACGTA
AAAACCACTC CGGCTTTGCC GGGGGATGCC AAGGTTTATG CTTTCCATCC TATTGGGTTG
ATTAGTAATT TTTCTTCTCC ATCGGAATGC TGCCAACTTA CCATGGCATC GTTTCGATCT
ATTTTTGGAG ACCGAAAGAT ATTCAACCAT CGCGACATGC CACGCGGTGG TGACACATAC
GAAGCTGACA TACAAAAATT TATTGACTTA CTCAATGATG GATTTTCAAA AAATGGTTTT
GAAACGTGCA TTTATAAGCA GCACTTTCTC GCACAGTGCT ATCACGAAAG CGATCACTTT
AACACCACCA TAGAATATGC AAGCGGTCTA GACTACGACT TATCAAAATA TCCAACTTCC
GTGTGCGATG TTAATAGCTC GGAATACGAC AAGAAGAAAT GCAGGCGCCG CAACCAGATC
ATACAAGAAG GTAATACCAC TATTGGCGAT GGACCAACCT ATAAGGGAAA GGGAATCATT
CAGCTTACGT GGAAAGGCAC GTACAATGCC TACAAGGAAT ACTCTGGCTC GGATGTTGTG
AGCAACCCAA TGAAGGTAGC CGAAGATCTA GCCACAGCTG TTAGTACGGC ATTTTGGTTC
TGGGCAAAAT TTAAAGGAGA GGACCTCAAT AGAAAGATAG ATCGCTATTA CGAAGAAGGG
GCTAAATCCG GCCTTAATTC GGAAGCCCTT GATGATGACG TTGTTAGAAG ATTAACCAAG
ATAATTAACG GAGGAGATAG AGGGCTTTCC GAACGGCAAA ATTTGCTTAA GAAAATTAAA
AAGGAAATGC AATGA
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| Protein sequence | MADTEQKKLA KISKLVHPFQ KSAKAGKAGA KPTDIDDPQV YFDALSNAQD GFYPIGANGQ
WHGGIHFDTQ TGNTLAQEDG IRCIGDGEVV AYQIDAKYPS IEYSAGKATY SRGFVLVRHR
LELPPAPKQT TQPAPAGPSA ANTAPATPQP VAQPAATLDQ KAQEPSLIFY SVYLHLLDWA
GYQADPKKPR PAFWKSVAYM VGDKAKDSDR VSNPSIPEGG VGLNLRDAQH QKVGYAPRGA
KLRLGAENPN KKGYFVISEV VSGQTVPADA KGLYAYKAEL TAAGAEPDRQ DAVYVLPTPA
PIKAGDLIGY LGHYQRFADL TPLAAAGPAQ NGVRPLIQLD VFTAEDLKTF IAKSRERAKL
LDAKQKTLLK IDVGAKLVLP SEPDQQIGAE EAAAVVPGGK VGAWVQVRKG TLQIMDKDSL
SGFNSTTHTY GGGQILHRVL GASDSDSITE AAYNALKTKE EKDKYPRRQV LVPSGAPVWV
DKAMMGADAS VADRSLKAWS TFPLQASQAN GPEAGFIRVA AIKTLKKVAT EPDGTRWWEV
DVGKIDGSSA VGWAREKDHA KVTRCSPWEW PGFEFIEADG TTPEALYARH VVATKQAKPD
EQAALEAKAA QANGGPLFSR VCDAIDLDDD RHLTPAELRK ALKQPWLAEA ISRLVFHHTS
EWGTPRAQWN AIDGDIPESR KADWEKEKDR IESLQWWSDV KTTPALPGDA KVYAFHPIGL
ISNFSSPSEC CQLTMASFRS IFGDRKIFNH RDMPRGGDTY EADIQKFIDL LNDGFSKNGF
ETCIYKQHFL AQCYHESDHF NTTIEYASGL DYDLSKYPTS VCDVNSSEYD KKKCRRRNQI
IQEGNTTIGD GPTYKGKGII QLTWKGTYNA YKEYSGSDVV SNPMKVAEDL ATAVSTAFWF
WAKFKGEDLN RKIDRYYEEG AKSGLNSEAL DDDVVRRLTK IINGGDRGLS ERQNLLKKIK
KEMQ
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