Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_02027 |
Symbol | |
ID | 6307290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3892440 |
End bp | 3893297 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642641034 |
Product | pirin |
Protein accession | YP_001914882 |
Protein GI | 188577953 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.223829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA CGACCACCAC GGCCGCGCAC GTGTTGCGCA CGATCCGCGG CATGCCGACT TCCGACGGGG CCGGCGTGAA GCTGACCCGC GTCATCGGGA CGCAGCAGCT ACCGGAGCTG GACCCGTTTC TGATGCTCGA TGAGTTCGGT ACCGAGAAGG CCGAAGACTA TCTGGCCGGG TTCCCCAGCC ACCCGCACCG CGGCTTCGAG ACGGTGACCT ACATGCTCGA CGGGCGCATG CGCCATAAGG ACAACCACGG CAACGAAGGC CTGCTGACCC CGGGCAGCGT GCAGTGGATG ACTGCCGGCC GCGGCCTGAT CCATTCGGAA ATGCCGGAGC AGGAATCCGG ACGCATGCGC GGCTTTCAGC TGTGGGTAAA CCTGCCGGCA CGCGACAAGA TGACCGATCC CAAGTATCAG GAGTACGCAC CGGACCATAT TCCAGTGGCG CATCCGGCGC CCGGCGTAAC CGTGAAGGTG ATTGCCGGTG CGGTCGGCGA GGTGGTGGGG CCGATCGTGC AACCTGCAAC GCGCCCGGTC TATCTGGACA TCATGTTGGA ACCGAACGTG GAGTGGGATG ACCTGCTGCC CAACGGGCAC AACGCGTTTG CGTATGCCTT CGAAGGCGCG CTGACGGTGG GCGAGGGCGA TGCAGCACGC GCGTTGCTGG CGCAGCAACT GGCGGTGCTG GGTGGTGGCG AGCGCTTGCG TCTGCGTGCC GGTGCCGATG GCGCGCAATT GATTCTGGTC GCGGGTCGCC CGCTCAACGA ACCGGTCATG CGGCATGGCC CGTTCGTGAT GAACACCAAG CAGGAACTGA TGCAGGCGTT CGTCGATTTC CAGGAAGGCC GGTTTTGA
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Protein sequence | MSTTTTTAAH VLRTIRGMPT SDGAGVKLTR VIGTQQLPEL DPFLMLDEFG TEKAEDYLAG FPSHPHRGFE TVTYMLDGRM RHKDNHGNEG LLTPGSVQWM TAGRGLIHSE MPEQESGRMR GFQLWVNLPA RDKMTDPKYQ EYAPDHIPVA HPAPGVTVKV IAGAVGEVVG PIVQPATRPV YLDIMLEPNV EWDDLLPNGH NAFAYAFEGA LTVGEGDAAR ALLAQQLAVL GGGERLRLRA GADGAQLILV AGRPLNEPVM RHGPFVMNTK QELMQAFVDF QEGRF
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