| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_02013 |
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| Symbol | murD |
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| ID | 6307302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3905545 |
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| End bp | 3906951 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642641046 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001914894 |
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| Protein GI | 188577965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAATTT CGCAGTTTGA AGGCAAGGCG GTTGCGTTGT GGGGCTGGGG ACGCGAAGGA
CGCGGGGCGT ATCGTGCGCT GCGCGCGCAG CTGCCCACCC AATCGCTGAC GATGTTCTGT
AACGCTGAAG AGGTGCGCGA ACTCGAATCG CTTGCAGACG CAGCCTTGCA TGTGGAAACC
GATGCCAGCG CGCAGGCGTT GGGGCGATTC GAGATTGTGG TGAAGTCGCC CGGCATCAGC
CCGTATCGCG CTGAGGCACT GGCCGCCGCC GCGCAGGGCA CGCAATTCAT TGGCGGCACC
GCGCTGTGGT TTGCCGAGCA CGCGCAGCCG GACGGCAGCG TGCCTGGCGC CATTTGCGTT
ACCGGCACCA AGGGCAAGAG CACCACCACT GCGTTGCTGG CGCACTTGCT GCGCGTGGCC
GGGCATCGCA CTGCGTTGGT CGGCAATATC GGCCAGCCCC TGCTGGAAGT GCTGGCACCG
CAGCCGCCGC CGGCGTATTG GGCGATCGAG TTGTCCAGCT ATCAAACCGG TGATGTCGGA
CGCAGCGGCG CGCGCCCGGA GCTGGCGGTG GTGTTGAATC TATTTCCCGA GCATCTGGAC
TGGCACGGCG ATGAGGCGCG CTATGTGCGC GACAAGCTGT CGCTGGTGAC CGAAGGCCGG
CCGCGGATCG TCTTGCTCAA CGCGGCCGAC CCGCTTCTTG CCAGTTTGCA GCTGCCCGAC
AGCGAGGTGC TGTGGTTCAA CCATCCCGAG GGCTGGCATT TGCGTGGCGA TGTGGTCTAT
CGCGGCGAAC AAGCCATTTT CGATAGCGCT GACGTGCCGC TACCGGGCGT GCACAATCGC
CGCAACCTGT GCGCGGTGCT GGCAGCGCTG GAAGCCCTGG GCCTGGATGC TGAAGCACTG
GCGCCGGCAG CCTTGAGCTT TCGTCCGTTG CCGAACCGCC TGCAGGTGCT CGGCAGCGTG
GACGGCATCA GCTACGTCAA CGACTCGATC AGCACCACGC CGTATGCCTC GCTGGCCGCA
TTGGCGTGCT TCGCGCAGCG TCGCGTTGCC TTGTTGGTCG GCGGGCACGA CCGTGGCCTG
GACTGGCACG ATTTCGCCCG GCACATGGCG CAGCAGGCGC CGCTGGAAAT CGTCACCATG
GCTGCCAATG GCCCGCGTAT CCATGCGTTG CTGGCACCGC TGGCCGACGC CGGGCGCTTC
GGCTTGCATG CCGCAAACGA TCTGGAACAC GCCATGCAAC TGGCGCGCGA TGCGTTGGGC
GGGCAGGGGG GCGTGGTGCT GCTCTCGCCG GGGGCGCCCA GCTTCGGCGC CTATAGCGAC
TACGTTGCGC GCGGTCGGCA CTTTGCCCAG CTGGCGGGGT TCGACCCGGC GGCGATCAGC
GCGATTCCCG GGTTGGGTGT GCATTAA
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| Protein sequence | MRISQFEGKA VALWGWGREG RGAYRALRAQ LPTQSLTMFC NAEEVRELES LADAALHVET
DASAQALGRF EIVVKSPGIS PYRAEALAAA AQGTQFIGGT ALWFAEHAQP DGSVPGAICV
TGTKGKSTTT ALLAHLLRVA GHRTALVGNI GQPLLEVLAP QPPPAYWAIE LSSYQTGDVG
RSGARPELAV VLNLFPEHLD WHGDEARYVR DKLSLVTEGR PRIVLLNAAD PLLASLQLPD
SEVLWFNHPE GWHLRGDVVY RGEQAIFDSA DVPLPGVHNR RNLCAVLAAL EALGLDAEAL
APAALSFRPL PNRLQVLGSV DGISYVNDSI STTPYASLAA LACFAQRRVA LLVGGHDRGL
DWHDFARHMA QQAPLEIVTM AANGPRIHAL LAPLADAGRF GLHAANDLEH AMQLARDALG
GQGGVVLLSP GAPSFGAYSD YVARGRHFAQ LAGFDPAAIS AIPGLGVH
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