Gene PXO_01972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01972 
Symbol 
ID6307340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3938222 
End bp3938797 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content59% 
IMG OID642641084 
ProductISXo8 transposase 
Protein accessionYP_001914932 
Protein GI188578003 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0687025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACAAA TAATCATACC TTTGTGCCAC TATTGGAAGA CCTTCAGGCC GCGCGGGAGA 
GCTGTGTTGA ATAGGACACT GGAAGTGCGT TTTGAACAGT ACGGGGAAGT AGTTGCTGCC 
GCCCTGTCCC ATGCGGATCG CAAACAGCCC GCACACTGGT ACCTGAAGGG GTTGCTACTG 
CCTGGAGGGC GCAAGAGCGT GGAGCCCATG GCCGCGCGGG TGCACCCGCA GAACGTGCGC 
TCAGCCCATC AATCGATGCA CCATCTGATG GCTGATGCCG ACTGGAGCGA TCAAGCGCTG 
CTGGCGGCGG TGGCGGCACA GGTGCTGCCG ACCCTGAACA GCAAGAGCGC AGCGTGTCAC 
TGGATCGTGG ACGACACGGG ATTTTCAAAG AAGGGGGTGC ATTCGGTCGA CGTCCCCCCA 
AGTTTGAGTA GCACCTTGGT TTGGAGTCCA ATTCCCTACC CCGAGGAGAT TGGACGTGAA 
GAAGCGTTTT TCCGAAGAGC AGATCATCGG CTTCCTGCGC GAAGCCGAGG CCGGCATGCC 
GATCAAAGAC CTGTGCCGAC GGCATGGCTT CAGTGA
 
Protein sequence
MLQIIIPLCH YWKTFRPRGR AVLNRTLEVR FEQYGEVVAA ALSHADRKQP AHWYLKGLLL 
PGGRKSVEPM AARVHPQNVR SAHQSMHHLM ADADWSDQAL LAAVAAQVLP TLNSKSAACH 
WIVDDTGFSK KGVHSVDVPP SLSSTLVWSP IPYPEEIGRE EAFFRRADHR LPARSRGRHA 
DQRPVPTAWL Q