Gene PXO_01958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_01958 
Symbol 
ID6307355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp3952809 
End bp3953534 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID642641097 
Producttransposase 
Protein accessionYP_001914945 
Protein GI188578016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.064583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGCG CACCGGCGCG TCGTGCGCTG GTGCGCGAGT GGATCGACGG TGGCGCCAGC 
GAGCGCTGCG CCCTGGCAGC GATCGGCATG AGCGCCAGTG CGCTGCGCTA TCGCCCGCGC 
GAGGACCGCA ACGTTGAGCT GCGTGAGCAC AGTGTTGCGT TGGCGCATCG CCATCGCCGC 
TACGACGTGG GGATGATCTC TCTCAAGCTG CGGCAGGAAG GTCGCCTCGT GAACTATAAG 
CGGGTGGAGC GGCTGTATTG CGAGCAGCAG CTGCAGGTCC GCCGCCGCAC GCGTAAAAAG 
GTGCCGGTAG GCGAGCGTGC GCCGTTGCTG CGGCCCACCA AGGCCAACCC GGTGTGGTCG 
ATGGACGTCG TGTTCGACCG CACCGCCGAA GGCCGAGTGA TCAAGTGCCT GGTGATCGTG 
GACGACGCGA CACACCAGGC AGTCGCCATC GAGGTGGAAC ACGCCATCTC CGGCCACCGG 
GTAGCACGCG TGCTGGATCG GTTGGCACAC AGCGGCGGCC TGCCGCAGGT GATCCGCACG 
GACAACGGCC ATGCGCAAGG TTGGGACGCG TATCACGCGA TCTGCAACGC AAGCTGGACC 
AGCAGTAACC GTCGGTACGT GAGCGCATCG GTGTCTGGTT GGAGCGCGCA CAACGGTTGT 
TGGCACAGCG TCCCAAGGAC AAACAGAAAC TCTACGCGTT GCACGCACCG GAAGTGGAAT 
GCATGA
 
Protein sequence
MVSAPARRAL VREWIDGGAS ERCALAAIGM SASALRYRPR EDRNVELREH SVALAHRHRR 
YDVGMISLKL RQEGRLVNYK RVERLYCEQQ LQVRRRTRKK VPVGERAPLL RPTKANPVWS 
MDVVFDRTAE GRVIKCLVIV DDATHQAVAI EVEHAISGHR VARVLDRLAH SGGLPQVIRT 
DNGHAQGWDA YHAICNASWT SSNRRYVSAS VSGWSAHNGC WHSVPRTNRN STRCTHRKWN 
A