Gene PXO_01957 details

Gene Information

• Locus tag: PXO_01957
• ID: 6307356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3953522
• End bp: 3954064
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642641098
• Product: transposase (IS4 family)
• Protein accession: YP_001914946
• Protein GI: 188578017

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.184478
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAATGCA TGAGCAAGGG CAAGGCAAGC AGCCCCTACG AATGTGGCGT CAAGGTCGGC 
ATTGCGGTGA GTGCGCGCAA GGGCTTGATC GTGGGCGCGC GCAGTTTTCC CGGTCATCCC 
TACGACGGCG ATACGTTGGC CGAGCAACTG GAACAGGCGC GCGGGCTGCT GCAGGATGTG 
AATGTGATCC CGCAGGTGGC GATCGTGGAC CTGGGGTATC GCGGGCGGGA CGTGGAGGGT 
GTGCAGATCC TGCATCGGGG CAAAGCCAAG ACGCTGACAC GACGGCAATG GCGCTGGATC 
AAACGACGGC AAGCGGTAGA GCCGGTGATC GGACATCTGA AACAGGACTG CCGCTTGAAT 
CGCTGCCATC TCAACGGCGC CCAAGGCGAT GCACTGCACG TGCTCGGCTG CGCCGCTGGC 
GACAACCTGC GGTGGCTGCT GCGCTGGATC GCATGTTTGC GTGCCTGGTT GCAGGTGGTG 
CGGGCGCGTT CCTCAACGCC CTCAAGCACC ATGTGGTCCG CAAACATGGC ACTGGAGGTT 
TGA 

 

Protein sequence

MECMSKGKAS SPYECGVKVG IAVSARKGLI VGARSFPGHP YDGDTLAEQL EQARGLLQDV 
NVIPQVAIVD LGYRGRDVEG VQILHRGKAK TLTRRQWRWI KRRQAVEPVI GHLKQDCRLN 
RCHLNGAQGD ALHVLGCAAG DNLRWLLRWI ACLRAWLQVV RARSSTPSST MWSANMALEV