Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01933 |
Symbol | |
ID | 6307378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3983219 |
End bp | 3983980 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642641119 |
Product | 4-hydroxy-2-oxovalerate aldolase |
Protein accession | YP_001914967 |
Protein GI | 188578038 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGTTG CAGTCGGCAT CCTCAATGCA GTGCCAAGCG TGCAGCTCTG CGAATTGCTG GGCCGCATCG GCTACGGCTT TGTGGTACTC GACCTGGAGC ATGTGCTGCG CGCGCCCGAT GAACTTGAAC ATGCCATCCG CGCCTGCGAA TTGTCGGGCT GCGAGGCCTG GGTCCGCGTG CCGGAGGTGG ACGAAAAACT GATTGGCCGG GTGCTGGATG CCGGCGCACG CGCGATCGTC ATTCCGCGGA CCGAGTCTGC GGCGCAGATT GCTAACGCCG TCGCCGCGGC GCGCTTCCCG CCATTAGGCC GGCGCGGCAT CACCGGCGGC CGTGTCACCG GCTTCGGCAA CATCGATCTG CCCACCTACA TCGCGCAGGC CAATGCGGAC ATCCGCATCG TGCCGATGAT CGAAAGCGCC GCAGGCGTCG CCGCACTTCC GGAAATTCTC GCAGTCCCGG GCGTGGCCCT GGTGATGGAA GGCGCGTTGG ATCTTGCGCT GGATCTGGGC CTCGGACCGC AGCCCCGCCA TCCGCAGGTG TGGGAGCTGC TGCTGCAACT GCATGCGCAG TGCGTTGCCG CCAACGTACC TTTTTGCCCC AACCCGCGCA CCGAGACGCA ACGCGCGCAC TGGCTGCAAC AGCCGGCGCT GCGCTGGCTG CTGGCCGGCG AAGACCGCGC ACTGATTCAA CGCGCATTGC GCGGCCATCT GGCCAGTTTT GCTGTCCCCA CTTCACCACT CGCCTGCAGG AGCAAACCGT AG
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Protein sequence | MAVAVGILNA VPSVQLCELL GRIGYGFVVL DLEHVLRAPD ELEHAIRACE LSGCEAWVRV PEVDEKLIGR VLDAGARAIV IPRTESAAQI ANAVAAARFP PLGRRGITGG RVTGFGNIDL PTYIAQANAD IRIVPMIESA AGVAALPEIL AVPGVALVME GALDLALDLG LGPQPRHPQV WELLLQLHAQ CVAANVPFCP NPRTETQRAH WLQQPALRWL LAGEDRALIQ RALRGHLASF AVPTSPLACR SKP
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