Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01882 |
Symbol | |
ID | 6307111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3693168 |
End bp | 3693983 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642640858 |
Product | TonB family C-terminal domain protein |
Protein accession | YP_001914707 |
Protein GI | 188577778 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.162741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTTC GCACGCAATC GCAGGTTTCT TCCCGTCCCC TTGGTATCGA CACCTCGCGC GTTCTGGCGA TGAGCACGGC CGTGGCATTG CACCTACTGG CGGGCGGATT GTTGTTGATT CCGCTCTCGC AACGCGCGAT TCCCCAGCAG ACCGCACCCA AAGAGCGCTG GCTCCTGCCG GTCAGCATCC CCACGCCGCC ACCGATTGTT TTTCCAGTCA ACGTAACATT CACGCCGAAA ACGCATCCAC CGACCAAAAC GCTGCCGGTG CCGGTGCAAG CCGCAGTGAT CACGCAGGAG CCAGTGGTCG ATAGCGCGGT GTTTGCCGTT CCCGCGACGA TCTCCGACGT CGCAGCAGAA AGTGCGCCCA CGACCACCAC ACCCAGCGGC CCGATCGAAG CGGGTCAATT GCAGTATCTG AGTTCGCCAG CGCCAACCTA TCCGGCGGCC GCACTGCGCG CAGGTCAGCA AGGCACGGTG ATGCTGCGCG TATTGGTCGG CACCGATGGG CGTCCGGCCG AAGTGAGTGT GCAGACCAGC AGTGGTCATC GCGCGCTCGA CCTGGCCGCA CGTAGCCAAG TGCTGCGCAG CTGGCGCTTC CAGCCGGCGA TGCAGAACGG CCAGGCCGCA GGCCTATGGT CTGGTGCCGG TAAGCTTCTC GTTGCATTGA GTGGCAACCC GATGCGGCGG CTTGCAATTG CAGCCGCCGC ATCGATACGA CGCAGCTCAG ACGAACGACA ACTGCCCACC CAGCCACTAC GAACGCGTGC GCTCGGGTCG GCAACAAAGT GCAACATCGC CGCAGCATCT GTTTGA
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Protein sequence | MMVRTQSQVS SRPLGIDTSR VLAMSTAVAL HLLAGGLLLI PLSQRAIPQQ TAPKERWLLP VSIPTPPPIV FPVNVTFTPK THPPTKTLPV PVQAAVITQE PVVDSAVFAV PATISDVAAE SAPTTTTPSG PIEAGQLQYL SSPAPTYPAA ALRAGQQGTV MLRVLVGTDG RPAEVSVQTS SGHRALDLAA RSQVLRSWRF QPAMQNGQAA GLWSGAGKLL VALSGNPMRR LAIAAAASIR RSSDERQLPT QPLRTRALGS ATKCNIAAAS V
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