| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01876 |
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| Symbol | holA |
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| ID | 6307117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3698329 |
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| End bp | 3699357 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642640864 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001914713 |
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| Protein GI | 188577784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.84431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC GCCCCGAGCA ACTGGCCGGC CAGTCCAACC AGCCGTTGCA GCCAGTCTAT
CTGATCGCCG GCCCGGAGAC CTTGCGTGTG CTTGAGGCCG CCGACGCTGT GCGCGCGCGC
GCGCGCGCTG AAGGCATCGG TGAACGCGAA GTCTTCGATG CCGATGGCCG CGATTTCGAC
TGGAATCAGC TCGACGCCAG CTTCAACGCG CCCAGCCTGT TCAGTCCGCG CCGCCTGGTC
GAGGTGCGCC TGCCCAGCGG CAAGCCCGGC AAGGATGGCG CCGAGGTCAT CACCCGCTTC
TGCGCCAACC CGCCGCCGGA TGTGGTGCTG CTGATCACCG CCAACGACTG GAGCAAGGCG
CATCAGGGCA AGTGGGCCGA GGCCGTCGGC CGCATCGGCA CGATTGCCGT TGCCTGGGCG
ATCAAGCCGC ATGAACTCTC CGACTGGATC GAGCGTCGCC TGCGTGCGCA CGGCCTGCGT
GCCGACGCCG CCGCGGTGCA GCGCCTGAGC GAGCGGGTGG AAGGCAACCT GCTTGCCGCT
GCGCAGGAAA TCGACAAGCT CGCTCTGCTG GCCGATGGCA AGACACTGGA TCTGCAGGCG
ATGGAGTCGT TGGTGGCCGA TGCCGCACGC TACGACGTCT TTCGGCTGGC CGAAACCACG
TTTTCGGGGC AGCCGGCCGC GGTGATCCGC ATGCTTGCCG GCCTGCGCGC CGAAGGCGAG
GCGGTCGCCG CGCTGATGCC GATCCTCATC AAGGAATTAC TTCGCACTGC GTCGCTGGCG
AAGGTGCAGG CCAACGGCGG CAACCTCGCT GCCGAAATGA AGGCGCAGGG GCTGTGGGAA
TCGCGCCAGG CGCCATTCAA GCGCGCGCTG CAACGTCACC CCGAACCGCG TCGCTGGGAG
CGCTTCGTCG CCGAAGCCGG GCTGGTCGAT CGCATGGCCA AAGGTCGCGC CGACGGCGAC
GCCTGGGTGG GTCTGGAACG CCTGCTGGTG GCCGTGGCCG AAGCCCGCGC GGTGAGATTG
TTGGCGTGA
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| Protein sequence | MELRPEQLAG QSNQPLQPVY LIAGPETLRV LEAADAVRAR ARAEGIGERE VFDADGRDFD
WNQLDASFNA PSLFSPRRLV EVRLPSGKPG KDGAEVITRF CANPPPDVVL LITANDWSKA
HQGKWAEAVG RIGTIAVAWA IKPHELSDWI ERRLRAHGLR ADAAAVQRLS ERVEGNLLAA
AQEIDKLALL ADGKTLDLQA MESLVADAAR YDVFRLAETT FSGQPAAVIR MLAGLRAEGE
AVAALMPILI KELLRTASLA KVQANGGNLA AEMKAQGLWE SRQAPFKRAL QRHPEPRRWE
RFVAEAGLVD RMAKGRADGD AWVGLERLLV AVAEARAVRL LA
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