Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01821 |
Symbol | |
ID | 6306498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3066041 |
End bp | 3066445 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642640252 |
Product | transposase |
Protein accession | YP_001914109 |
Protein GI | 188577180 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000045905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGTCG CCGGCGCTGG TATTGCCGCT GCTGGTCGCC CACGCCTGAT GGCCAGCCTG GCGTACATGA AGCACGCCGA CAAGCTCAGC GGCGAGGAAC GGGTGCAGCG CTTGGCCGAG AACGTGGTCT GGCAGCACGT CAGCGGCATG GTGTTCTATG CGCCGCGCCT GCCCTGCGAT GCCATGCAGG TCGGGCGTTT TCGCGCTGCC ATCGGTGAGG CCGGGGGCGA GGAATGGCTC AAGGCCACCA TCGACACCGC GGTGTCCTCG CTGTCACTGG GGGCCGGGGT TTTTCAGGAG CGAATACTGC GCCTGCGCCA AGCCCAGCAG CAGGGTGGGA TCGTCGCGAT ACAGGGAATC AGTGGCTGCG AGCGGCCATG GTGGGATTCT CAGCGGCCTT CGTAG
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Protein sequence | MQVAGAGIAA AGRPRLMASL AYMKHADKLS GEERVQRLAE NVVWQHVSGM VFYAPRLPCD AMQVGRFRAA IGEAGGEEWL KATIDTAVSS LSLGAGVFQE RILRLRQAQQ QGGIVAIQGI SGCERPWWDS QRPS
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