Gene PXO_01796 details

Gene Information

• Locus tag: PXO_01796
• ID: 6306521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 3091500
• End bp: 3093389
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642640275
• Product: hypothetical protein
• Protein accession: YP_001914132
• Protein GI: 188577203
• COG category: [S] Function unknown
• COG ID: [COG4805] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.378298
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCTGT CGCTGGCGGC GCCGGCCGAG GCGGCCAAGA AGAAAACCGC CAAGGCACAG 
ACCACGCAAA CGCGCGCGAA GGCGAGCAAA GGCAAGAAGA CCGCCAAGCC GGCAGCCAAG 
AGCACCAGGG GCAAGCGCAG CAAGGCCGCC ACGGTCAGGC CACGCGCGGT TGCCGCGCCG 
GTGGTGCTGA CCAAGGCGCA GCAGCTCAAC CTGCTGTACG ACCAATACTG GGACGCCTCG 
CTCAAGCTCA ACCCGCTGCA GGCCACCTTC CAGGGCGAGA GCCGCTACAA CGACCAGTTG 
CCGAACTTCC TATCGCCGGC GTTCCGCCAG CAGTCGCACG ATTTCACCGT GCTGTGGCTG 
GGCAAGGCCG AGGCACTGGG GCCCGATGGC CTCAGCGGGC AGGACCTGCT CAGCTACCAG 
ATCTTCGTGC GCGATGCGCG CAGCGCGCTG GCCGCCGAGC AGTTCCCGAG CTGGATGCTG 
CCGATCAACC AGTTCTACAA CATCGCCAGC ATTGCGGTGG TGTTGGGCTC GGGCACCGGC 
GCGCAGCCGT TCAAGACGGT CAAGGATTAC GATAACTGGT CGCGGCGTGC GCTCGGCATC 
CCCGACCTGT TCGAGCAGGC CATCGCCAAC ATGCGTGCCG GCATGCAGGC CGGCGTGGTG 
CAGCCCAAGG TGCTGATGCA GAAGGTGTTG CCGCAGCTGG ACGCGATCAT CGCGCGCAAC 
GCCGAAGACA GCCTGTTCTG GGGCCCGGTG CGCAACCTGC CGGCCGACAT GCCCGATGCC 
GACAAGCAGC GCATCACGGC CGAGTACAAA CGCATGATCG AACTGCGCAT CATGCCGGCC 
TACCGCGCGT TGCGCGGCTT CATCGCCACC GAATACCTGC CCGCCTGCCG CGACAGCGAT 
GGGCTGGCCG AATTGCCGAA CGGCGCAGCG TGGTACGCCT ACGACGTGCG CCAGAGCACC 
ACCTCAGACC TGACACCGGA GCAGGTGCAT CAGATCGGCC TGGATGAAGT CGCTCGCTTG 
CAGGGCGAAA TCCAGACAGT GGCCAAACAG GTCAAATTCC GCGGCAGCCT GCCCAAGTTC 
TACAAGTTCA TGCAGACCGA CCGGCGCTTC AGCTACCGCA GCGACACCGA GTTGCTGGAC 
ACTTACCGCA GCCTGCAGGG CCGCGTGCAG CTGGCCGTGC CACGGCTGTT CAACACCCAG 
GGCATGCCGG CGCTGGAAGT GCGCGCGGTG GAACCGCAGC GTACGCAATC GGCTGCCAGC 
GGTTCGTACA TGCGCCCAAG CGGCAACGGC AGCACACCGG GCATCTTCTA CGTCAACACC 
TCCGACCTCC CCTCGCGCAA AACCTGGGAG GCCGAAAGCC TGTACCTGCA CGAAGCCGTG 
CCCGGCCACC ACTATCAGCT CGGGCTGCAG CAGCAGCTGA CCGATCTGCC CAAGTTCCGC 
CGCCTGGGCG GCGAGACAGC CTACATCGAA GGCTGGGGCT TGTACGCGGA ATCGTTGGGC 
CGCGAGCTGG GCCTGTATCA GGATCCCTAC AGCTATTACG GCTATCTGCA GAATGCGTTG 
TGGCGCTCGG TCCGCCTGGT CACCGATACC GGCCTGCACA GCAAGGGCTG GACGCGTACC 
CAGGCCATCG ACTACATGGT GGACAACTCG GCCATGACGC GTGCCGATGC CGAAGCCGAG 
GTGGACCGCT ACATGGCCAT CCCCGGTCAG GCGCTTGCGT ACAAGGTGGG CGAGATGAAG 
ATTGCGCAGT TGCGCGAGCA GGCGCAGCGC GAGCTGGGCC CGCGCTTCGA TGTGCGCGCC 
TTCCATAGCG AAGTGCTCAA GGACGGTTCG GTGCCGCTGG ACATCTTGCA GGACAAGATC 
CAACGCTGGA TCGCGACGCA GAAGGGCTGA 

 

Protein sequence

MSLSLAAPAE AAKKKTAKAQ TTQTRAKASK GKKTAKPAAK STRGKRSKAA TVRPRAVAAP 
VVLTKAQQLN LLYDQYWDAS LKLNPLQATF QGESRYNDQL PNFLSPAFRQ QSHDFTVLWL 
GKAEALGPDG LSGQDLLSYQ IFVRDARSAL AAEQFPSWML PINQFYNIAS IAVVLGSGTG 
AQPFKTVKDY DNWSRRALGI PDLFEQAIAN MRAGMQAGVV QPKVLMQKVL PQLDAIIARN 
AEDSLFWGPV RNLPADMPDA DKQRITAEYK RMIELRIMPA YRALRGFIAT EYLPACRDSD 
GLAELPNGAA WYAYDVRQST TSDLTPEQVH QIGLDEVARL QGEIQTVAKQ VKFRGSLPKF 
YKFMQTDRRF SYRSDTELLD TYRSLQGRVQ LAVPRLFNTQ GMPALEVRAV EPQRTQSAAS 
GSYMRPSGNG STPGIFYVNT SDLPSRKTWE AESLYLHEAV PGHHYQLGLQ QQLTDLPKFR 
RLGGETAYIE GWGLYAESLG RELGLYQDPY SYYGYLQNAL WRSVRLVTDT GLHSKGWTRT 
QAIDYMVDNS AMTRADAEAE VDRYMAIPGQ ALAYKVGEMK IAQLREQAQR ELGPRFDVRA 
FHSEVLKDGS VPLDILQDKI QRWIATQKG