| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01741 |
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| Symbol | |
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| ID | 6306576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3144382 |
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| End bp | 3146073 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642640330 |
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| Product | Putative CHASE3/GGDEF domain-containing signal protein |
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| Protein accession | YP_001914187 |
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| Protein GI | 188577258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGGC GCAACCAGCT GGCGCTGATG TTCTCTGCGC TGATCTTTGT CGTCATCGGA
ATCGGCATCT TCGTCGGTGC CCGTCGTTCG CTGGCCGATG CCGCGCTGGT GTCGCACACC
CACGAGGTGA TCGGCCGTGT CGACGAGATC CAGGCCCGCG TGCTCGATGC CGAATCCGCG
CAGCGCGGCT TCCTGCTCAC CGGCAACGAC GCCTACCTGC TGGACTACCA GACCAGCGTC
GAACGTCTGC CGATCCTGCT CGACAAGCTG CGCCGCCTGA TCGTCAACAA CCCTGCACAG
GAACAGCACC TGACGCAATT GCAACGGCTG GTGGAAACGC GCCTGCGGCA ACTTCAGCAT
GTGCTCGACG TCTATGCGCA AGGTGGGCTG GAGCCGGCAC GCGCCGACAT TCGGCAGAGC
GCCTTCCGCA CCACCAGCGC GATCCGCGAG CAGGCATTGA CGATGGTGCA GCGCGAGCAG
GAGCTGCTGG CGCAGCGCGC CGAAAGCAGC GGCCAAAGCG CACACCTGTT GCTTGCGCTG
GGCTTGGCCG GCATTCCATT CGGGCTGATG GTGGTCGGCA TGGTCTATGC GCTGTTGATG
CGCGAACTGC GCCACCGTGC GCAGGCCGAA CAACTGGCCG CGCAGGCAAA TCGCGAGCTG
GGCGAGAGCA TCGACGCACT GCAGCGTAGT ACTGCCGATC TCAATCTGCT CAGCCGTTAC
ACCGGCCTGC TGCAGAGCTG CATCAGCGCC GAAGAAGCGC TGATGGTCAG CAGCCGCACC
CTGGCCAGCC TGCTGCCGGG CGTGGCGGGA AGCGTGTACC TGCTGCGCGC TTCGCAAGAC
CGTGCCGAGG CGATCAGTCA CTGGGGCGAG CCGCTGGTAT GCAGCGCGCC GCATCTGTTG
CCGGAACAAT GCTGGGCGCT GCGCCGCGGA CAGCCGCACA TCATCGAATA CCTGGGCCGG
GATGCGCTCT GCGCGCACAT CGACGAACTC CCCAGCGATG CGTCGGTCAC CACCGCGTGC
CTGCCGATGT CGGCGCAAGG CACCCAGCTC GGCTTTCTGT TCCTGTCCGC GGCCGGCCCG
GGCCCGATGC CGCGACTGGA AATCGCCGAG GCGGCGGCCG AGCAGTTGTC GTTGGCGCTG
AGCAACCTGC GCCTGCGCGA ATCGCTGCGC CGGCAATCGA TCCGCGATGC GCTGACCGGG
CTGTACAACC GCCGCTATCT GGAAGAATCG CTCAGCCACG AACTGGCGCG GTGCGCGCGG
CGTGGCCTGC CGTTGTCGGT CTTGATGCTG GACGTGGACC ATTTCAAACA GTTCAACGAC
AGCCAGGGCC ATGCCGGCGG CGACCTGCTG CTGGCGGCAG TGGGCGAATT GTTGCTCACC
CGCCTGCGCA CCGAAGATGT GGCCTGCCGC TACGGCGGCG AGGAATTCAC CGTACTTCTG
CCCGAGGCCG ATGGCGAGGA AGCCCTGCGC GTGGCTGAGC AGATCCGCGG CTACATCGCC
GCGCTGGCGG TCAGCGACGA AGCGCGCGCG TTGCCGAAGG TGACTGCCTC GATCGGCGTG
GCCAGCTTTC CGGCCGATGG CGAACAAGGT GCGAGCCTGA TCCAGAAAGC CGATGCAGCG
CTGTATCGCG CCAAGCACCG CGGGCGCAAT CGGGTGGAGC GACACGGCGC TGTCATGGAC
ACGGCGGGCT GA
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| Protein sequence | MRRRNQLALM FSALIFVVIG IGIFVGARRS LADAALVSHT HEVIGRVDEI QARVLDAESA
QRGFLLTGND AYLLDYQTSV ERLPILLDKL RRLIVNNPAQ EQHLTQLQRL VETRLRQLQH
VLDVYAQGGL EPARADIRQS AFRTTSAIRE QALTMVQREQ ELLAQRAESS GQSAHLLLAL
GLAGIPFGLM VVGMVYALLM RELRHRAQAE QLAAQANREL GESIDALQRS TADLNLLSRY
TGLLQSCISA EEALMVSSRT LASLLPGVAG SVYLLRASQD RAEAISHWGE PLVCSAPHLL
PEQCWALRRG QPHIIEYLGR DALCAHIDEL PSDASVTTAC LPMSAQGTQL GFLFLSAAGP
GPMPRLEIAE AAAEQLSLAL SNLRLRESLR RQSIRDALTG LYNRRYLEES LSHELARCAR
RGLPLSVLML DVDHFKQFND SQGHAGGDLL LAAVGELLLT RLRTEDVACR YGGEEFTVLL
PEADGEEALR VAEQIRGYIA ALAVSDEARA LPKVTASIGV ASFPADGEQG ASLIQKADAA
LYRAKHRGRN RVERHGAVMD TAG
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