| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01715 |
|---|
| Symbol | lepB |
|---|
| ID | 6306602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 3168499 |
|---|
| End bp | 3169299 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642640356 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_001914213 |
|---|
| Protein GI | 188577284 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.686082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGT TTGAAATCAT CCTGGTTGTC CTAACGCTCG GCAGTGGCTT CATCTGGCTG
CTGGACAAGC TGTTTTTGGC CAAGCACCGT GCCGCGCGTG CTGGTCTGCT GGACAGCGAG
CCGGCGATCA TCGATTACTC GCGCGCCTTT TTTCCCGTGC TGGCGGTGGT GCTGATCCTG
CGCAGCTTCG TGGCCGAGCC GTACAAGATT CCGTCCAGTT CGATGATGCC CAATCTATTG
ATCGGCGATT TCATCCTGGT CAACAAGTTC GCCTACGGTT TCCGTCTGCC GATCACCAAT
ACCAAGTTCA TTCCCACCGG CGAGCCAAAG CGTGGCGATG TGGTGGTGTT CAAGCCGCCG
CATGCGCCGG ACCAGAACTG GATCAAGCGC GTGGTGGGCC TGCCGGGCGA CAAGATCGGC
TTCCATGGCG ATACCCTGTA CATCAACGAC AAGCCGATGC ATTACACGGT CAAAGGCGAG
TACATCGGCA ATGGCAAGGG CGCTGAAATG ACCGGCACCA CGCTGCTGGT CGAGTATCTA
CCGGGCCGCA CGCATACCGT GCTGGAGTGG CTGGACCGCA ATATGCCGGC CGGGCAGGGC
GACTGGACCG TGCCGGCGGA CAGCTATTTC GTGATGGGGG ATAATCGCGA CAACAGCGAG
GACAGTCGGT TTTGGACCCA GACGCACTTT CTGCCGGAAG CCAATCTGCG CGGCAAGGCG
TTCCTGATCT GGCTCAATTG CGAAGGGTGG TTCTGCAAGG GGAGTTTCGA TCCATCGCGG
ATCGGGACTG GAATCCAGTA A
|
|---|
| Protein sequence | MKWFEIILVV LTLGSGFIWL LDKLFLAKHR AARAGLLDSE PAIIDYSRAF FPVLAVVLIL
RSFVAEPYKI PSSSMMPNLL IGDFILVNKF AYGFRLPITN TKFIPTGEPK RGDVVVFKPP
HAPDQNWIKR VVGLPGDKIG FHGDTLYIND KPMHYTVKGE YIGNGKGAEM TGTTLLVEYL
PGRTHTVLEW LDRNMPAGQG DWTVPADSYF VMGDNRDNSE DSRFWTQTHF LPEANLRGKA
FLIWLNCEGW FCKGSFDPSR IGTGIQ
|
|---|
| |