Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_01697 |
Symbol | |
ID | 6306621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3189551 |
End bp | 3191296 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642640375 |
Product | F5/8 type C domain protein |
Protein accession | YP_001914232 |
Protein GI | 188577303 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCT TCACCGACAA GGAATGGGGC TACGGCGACG AAGATCCGCG CAAATTCGAT CCCAGCGATT TTTCGGCCGA CCAGATCGTC GCTGCGGCAA AAGCAGGCAA TCTCAAGGGG CTGATTTTCA CGGCCAAGCA CCATGATGGG TTCTGTCTGT GGCCGACACG CTTGACCGAG CACTGCATCC GCAACTCGCC GTACAAGAAC GGCAAGGGTG ACATTGTCGG GGAGATGGCC GCGGCATGTC GCCGCGCGGG TCTCGCGTTC GGCCTGTACC TCTCGCCCTG GGATCGCAAC CATGCCGAGT ATGGTCGCCC CGGTTATATC GACTATTTCC GCAAGCAGAT CGTCGAGCTC TGCACCGGCT ACGGCGACCT GTTCGAGTTC TGGTTCGACG GTGCCAATGG CGGCGACGGC TATTACGGCG GGGCGCGCGA ATCGCGCAAG ATCGATGCGC CTGCGTACTA CAACTGGCCG CGGATGATCG GGCTGGTGCA CCAGCATCAG CCGATGGCAT GTACCTTCGA TCCGCTGGGC GCTGATATCC GCTGGGGCGG CAATGAAGAT GGCATCGCCG GCGATCCGTC CTGGCCGACC ATGCCCAATG CCCCGTACAC CCAGGAAAAC GGCAATTCGG GCGTGCGCGG CGGGGCGCTG TGGTGGCCGG CCGAAACCAA TACGTCGATC CGCCCGGGCT GGTTCTACCA CGCCGATGAA GACGGCAAGG TGCGGAGCCC GGAGAATCTG GTGCGCTATT TCGACACCTC GGTGGCGCGC GGCACCAACA TGAATCTCAA TCTTCCGCCT GACCGGCGCG GCCGCATTCC CGACCACGAC GTGGCGGTGC TGCAGAGTTT CGGCGACGCG ATCCGCGCCA GCTTCGCCAT CGATCTGGCC AAGGGTGCCA AGGCCACTGC CAGCGCATCG CGCGGCCCTG GGTTCGAGCC GTCGCGCGTA CTCGAACGCC AGCCGGACAG CTACTGGTCC ACGCCGGACG ATGTCACCAC GCCGACGCTG ACGCTGGAAC TGCCGACGGC GCACAGCTTC GACCTGATTC GATTGCGCGA ATATCTGCCG CTGGGCGTGC GCGTCACCCG CTTCGCGGTC GAAGCCGAGG TCGATGGGCA ATGGCGGCGA TTGGCCGAAG CGCAATGCAT CGGCGCGCAG CGTATCGTGC GGCTGGATCG CCCGATTGCC GCACGCCGGG TGCGCCTGGT GGTGCTTGAG GCGCCGGTCT GCCCGGCGAT CACCGAGTTC GCGCTGTTCC GCGCCGTTGC GCCGGTGCTG GTCGCGCGGC CGACGGCGAA TGCGCCGGAC GTGCTGTCCA CCGCCGGCTG GCGCATCGTC GAGGCGAGCG CGCCAGGGGC GGAAACGTTG CTCGACGACG ATGCCAGCAC GCTCTGGATC ACGCCGGCAC CGACGCCGGG CCATCCCGTG CAGGCGACCA TCGACCTCGG TGCGCTGCGC AAGGTGGCCG GGTTCAGCCT TACGCCCTCG CGCGCGGTGA TGACCGGTGC GGCACCGCCG AAGGGCTATC GCGCCGAGAC CAGCGAAGAT GGTCAGCACT GGCAACCGGC CGGTGCCGGC GAGCTGTCCA ACATCGCCTA TGCGCTCTCG ACCCAGCGGC TGAATTTCCC CGAGGTCCGC CAGATCCGCT ATCTGCGGCT GTCGTTCGCG GAAACGGCGG TGCCCGCCGA GCGGCTGGCG ATTGCGGGTA TCGGTGCGTT CTCGCGCCTG CGATGA
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Protein sequence | MNTFTDKEWG YGDEDPRKFD PSDFSADQIV AAAKAGNLKG LIFTAKHHDG FCLWPTRLTE HCIRNSPYKN GKGDIVGEMA AACRRAGLAF GLYLSPWDRN HAEYGRPGYI DYFRKQIVEL CTGYGDLFEF WFDGANGGDG YYGGARESRK IDAPAYYNWP RMIGLVHQHQ PMACTFDPLG ADIRWGGNED GIAGDPSWPT MPNAPYTQEN GNSGVRGGAL WWPAETNTSI RPGWFYHADE DGKVRSPENL VRYFDTSVAR GTNMNLNLPP DRRGRIPDHD VAVLQSFGDA IRASFAIDLA KGAKATASAS RGPGFEPSRV LERQPDSYWS TPDDVTTPTL TLELPTAHSF DLIRLREYLP LGVRVTRFAV EAEVDGQWRR LAEAQCIGAQ RIVRLDRPIA ARRVRLVVLE APVCPAITEF ALFRAVAPVL VARPTANAPD VLSTAGWRIV EASAPGAETL LDDDASTLWI TPAPTPGHPV QATIDLGALR KVAGFSLTPS RAVMTGAAPP KGYRAETSED GQHWQPAGAG ELSNIAYALS TQRLNFPEVR QIRYLRLSFA ETAVPAERLA IAGIGAFSRL R
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