| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01690 |
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| Symbol | |
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| ID | 6306628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3200513 |
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| End bp | 3204088 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642640382 |
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| Product | histidine kinase-response regulator hybrid protein |
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| Protein accession | YP_001914239 |
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| Protein GI | 188577310 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAC TGATCGTGGT GTTGGCTGTG CTGTTGGCCA TATCGCCGTG CGTGGCAAAG
ATTCCGGAAG TGCCGCGCTT TCGGATCGTC GGACCCAGCG AGGGATTGCC TTCGACGATG
GTGGTTGCCA TCGGCCAGGA CCGCGCCGGC TATCTATGGC TTGGAACGCT GGACGGTCTG
GTGCGGTACG ACGGCGCAGG ATTCAGGACC TGGCGTCACG ATCCGGCCGA CCCTGCATCG
TTGCCCTGCA ACGGGGTGCA GGCATTGCAT GTCGATGCGC AGGACCGGGT CTGGGTGGGG
TGCGGCAGGA CGTTGAGTGT CTTGGATGCC GGCCGCAGTC GCTTTCGTCA CTATCGCGCT
ATCGACTACC CATTGCTGAA GAACGGCGAG ATCTTCAGCA TCGCCACGTT CGATGGCGCC
ATCTGGGCCG GCACCACCAC CGGTGCGCTT GTGCGCATCG ATGCCAGCGG ACGGATGTCG
TCGGTGGATC TGGGCGAGCT CGAAGGCGCG CTGGATCAGG CCATGGTCAT GAACCTGGCG
GTGGATGATC GGCACCGCCT GTGGATCGGT ACCAGCAATG GCCTGGCCTA TTACGACGGC
AAGCGACTGC ACCGCGAATA CATACCGGAC GAACCAAACC GGCAGTCGGC CATCTTCGGT
TTGCAGTGGA CCGGCGACCG TTTATGGCTG GGAAGCGAAT CGGGATTGCA CGTGCTGCGG
GCAGACGGTC GCTGGCAGCC GTTTGCCTGG GCGACGATGT TCGGCAACGG GAATGAATTT
TGGGGGGCGG TGGCTGCGCC GGATGGCGAA TTCTGGCTGG GCAGCGGACG TGGTCTGTGG
CGTACGCGCG GTGAACGTCC ACCGGTGCCC GCTTTGAGCG GCGAGGGGCC CTTATCGCGC
CGCAACGTCA TCGGTTTGAT GGCCGCGGCT GATGGCGGGC TGTGGGTGCC CATGCATGGC
ACCGGGCTGG GATATCTGCC GGCAGACTGG AAACGCACCG CCGTGCTCAA GCCCGCGGCG
CCGATGGGCG ATGCGATTTA TTGCAACCTG GCGCCTGCCA AGCGCTCAGG GGGCTTATGG
CAGGTCGATG CGCAGGGGCG TCTGTTACGC GTGGATCCGA GCACCGGCGA AGCGTTTCAG
ACAGGCCTGC AATCGCCGCA GCTCAAAGGA ATGGAGTTGG TCTCTGCGCT GGAAGATGGC
CTGCAACGCG TGTGGCTGGG AAATTTGAGT TTTGGCCTGT CGCGGATGGA TCTGCGCACC
GGTGAGTTCA TTCATTGGCC ATCCGATGGG CCCGAGCCGG CCTCGGCCTT GTCGGCGCCG
GAATGGATCA CCGAGCATGG CGACACCGTG TGGATGGCCT TCATCGACAT GGTGCAGCAG
CGCGATCTGC GCACTGGCAA GGTCTTGCAG CGCATTACCC AGCAAGACCT GCATGGCCTG
CGCGCGATCG ATATTCAACA GCTGGAGCAA GGCCCCGACG GACGCGTATG GGTGGCCGGC
GAGGGCGGCA TGTTCGCGTG GGACGATGCG TCAGGCCGCT TCGTGCCGGT GCCAGGTATG
GCAGGAGCGC AAATCCAGGC ATTTGCCAGC CCGTCTGCGG AGACAGTCTG GGTGTATCGG
GCCTCCGGTG CAGAGCAATG GCAAAAGGTT GCAGACCGCT GGAAGCGGGT GCGCCAGGTC
GGCGAGGCGG ATGGGCTGAG CGGCTTCGAT GCCTCTGCCA TGCAGATCGA CCCCCATGGC
CGTGTCTGGA TTTCCAGTTT GCGCGGGCTG TGGCGGATTG ACCCCTCGGC GCATCCGGCG
CGGGTCCGCA ATATCGGCAC GCGCGACGGC TTGACCAGTC AGGAGTTCAT CCAGCATTGC
CTGTTGATGT CCGGCGATAC CTTGATCGGC GCAACCAGCG ATGGCTCTAC CGTGCTGCTG
GATACCGCAA TGCCGGATGT TGCAGCGTTC GTCCCGGCAT TGCAGCTGGA ACATGTCAGC
GTGCTGCGCA ATGGCGCACG TATCGCCCTG CCGATGGATC GCCCGTTCCA GCTGGGCCCG
GAGGATCGTC AGTTGCAGGT CGTCAGCCGC TTGTTGTCGT ACAGCGACCC GCTCTCCAAT
CGGTATCGCA GCTTCCTGAA AGGCTTCGAC ACGGACTGGC AAACCACAGG CAACTCGGGC
ATCCGCGAAT TCGCCAGCCT GCCTTCTGGC AACTATGAGC TCGCGCTGCA GGGCATCGAT
CCGCTGGGAA ATCGCTCGCA GGTACGTTCG CTGCAGTTTT CAGTCAGGCC GCCTTGGTGG
CGTAGCGATA TCGGTATTGC GCTGATCTGC TTTTCGGGAT TGCTGTTGAG CGCCTTACTG
GCTGCGGCTT ATCGCCGGCG TATTCGCATG CGCGCGCAAT GGCAGCTGGC GCAACACAAA
CGCGAGTTGG CCGAGCAGGC GTCGCTGGCC AAGACGCGCT TTTTGGCAAC GTTGGGCCAC
GAGGTACGCA CGCCCATGAC CGGTGTATTG GGCATGAGCG AGTTGCTGCT GCAGACACCG
TTGGACGGGC GTCAGCAAGG CTATGCGAGC GCGATCCAGC TGGCCGGTAA GCATCTGCTG
CGTCTGGTCA ACGATGCGCT GGATTTGGCC CGGATCGAAG CCGGCAAACT GCCACTGGAT
TACCGCGATT TCGACCTGCG TCAGTTAGTC GGGCAAGTGG CGGAACTGGT GCGCCCGAGT
GCCGAGCAGA AGCAGCTGGC CTTCCACTGC GCGCTCGACG ATGCATTGCC GCCGGCCTTG
CGTGGCGATG CCAGCCGCGT ACAGCAGATC CTGCTGAATC TGCTGTTCAA CGCGGTCAAG
TTCACCGAGC GCGGGAGCGT GCACCTACGC ATTGCGGCAC TGCCGCAGCA CACCCAGCAG
GGCATTCGTG TGGAAGTGCG CGACACCGGG CCGGGCATGA GCGCCGAGCA GCGCGGGCGG
CTGTTCCAGC GTTTCGAGCA GGCCGAAGGC GCGCTTACGC TTGCGCGACA CGGCGGCAGT
GGCCTTGGGC TGGCCATCTG CCGCGAACTT GCGGCGGCGA TGGGCGGCTC GGTGACGGTT
AGCAGTGAGT TGGGGCAGGG CGCGTGTTTC GTGGTCGAGC TGCCGCTGCG CTGGGTGTCC
ACGTTACCCG CTGTCACGCC ATCTGCAGTG CGCGCGCGCC CGCTGCACGA GCAGGCGCCG
TTGCGATTGT TGCTGGTGGA AGACGATGCG ACCGTGGCAC AGGTGATCGT TGGCCTGCTG
CAAACGCGGG GGCATCACGT CACCCATGTA GTGCACGGTC TTGCGGCGCT GGCCGAAGTC
AGTACGCGCC GTTTCGATGC AGGTTTGTGC GACCTGGATC TGCCCGGTCT CGACGGCGTA
GCACTGGTGG CGCAGCTACG CGCGCGCGGT GTGCGCTTCC CGATCGTGGC GGTGACTGCG
CGTGCCGATG CCGATGCCGA ACCACAGGCG ATGGCTGCGG GTTGCAACGG TTTTCTGCGC
AAGCCGGTCA CTGGCGATTT GCTGGCGCAG GCCTTGGCGC GGGTGCTTAC CGACGTCGAT
GATGGAGAGA ACGACGGTAA GGCCAGCGGC GCGTAG
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| Protein sequence | MRLLIVVLAV LLAISPCVAK IPEVPRFRIV GPSEGLPSTM VVAIGQDRAG YLWLGTLDGL
VRYDGAGFRT WRHDPADPAS LPCNGVQALH VDAQDRVWVG CGRTLSVLDA GRSRFRHYRA
IDYPLLKNGE IFSIATFDGA IWAGTTTGAL VRIDASGRMS SVDLGELEGA LDQAMVMNLA
VDDRHRLWIG TSNGLAYYDG KRLHREYIPD EPNRQSAIFG LQWTGDRLWL GSESGLHVLR
ADGRWQPFAW ATMFGNGNEF WGAVAAPDGE FWLGSGRGLW RTRGERPPVP ALSGEGPLSR
RNVIGLMAAA DGGLWVPMHG TGLGYLPADW KRTAVLKPAA PMGDAIYCNL APAKRSGGLW
QVDAQGRLLR VDPSTGEAFQ TGLQSPQLKG MELVSALEDG LQRVWLGNLS FGLSRMDLRT
GEFIHWPSDG PEPASALSAP EWITEHGDTV WMAFIDMVQQ RDLRTGKVLQ RITQQDLHGL
RAIDIQQLEQ GPDGRVWVAG EGGMFAWDDA SGRFVPVPGM AGAQIQAFAS PSAETVWVYR
ASGAEQWQKV ADRWKRVRQV GEADGLSGFD ASAMQIDPHG RVWISSLRGL WRIDPSAHPA
RVRNIGTRDG LTSQEFIQHC LLMSGDTLIG ATSDGSTVLL DTAMPDVAAF VPALQLEHVS
VLRNGARIAL PMDRPFQLGP EDRQLQVVSR LLSYSDPLSN RYRSFLKGFD TDWQTTGNSG
IREFASLPSG NYELALQGID PLGNRSQVRS LQFSVRPPWW RSDIGIALIC FSGLLLSALL
AAAYRRRIRM RAQWQLAQHK RELAEQASLA KTRFLATLGH EVRTPMTGVL GMSELLLQTP
LDGRQQGYAS AIQLAGKHLL RLVNDALDLA RIEAGKLPLD YRDFDLRQLV GQVAELVRPS
AEQKQLAFHC ALDDALPPAL RGDASRVQQI LLNLLFNAVK FTERGSVHLR IAALPQHTQQ
GIRVEVRDTG PGMSAEQRGR LFQRFEQAEG ALTLARHGGS GLGLAICREL AAAMGGSVTV
SSELGQGACF VVELPLRWVS TLPAVTPSAV RARPLHEQAP LRLLLVEDDA TVAQVIVGLL
QTRGHHVTHV VHGLAALAEV STRRFDAGLC DLDLPGLDGV ALVAQLRARG VRFPIVAVTA
RADADAEPQA MAAGCNGFLR KPVTGDLLAQ ALARVLTDVD DGENDGKASG A
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