| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01678 |
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| Symbol | prfC |
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| ID | 6306639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 3213851 |
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| End bp | 3215455 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642640393 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001914250 |
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| Protein GI | 188577321 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.790822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATG TCTCCAACGA AGCCGCGCGC CGCCGCACCT TCGCCATCAT TTCCCACCCC
GACGCCGGCA AGACCACGCT GACCGAAAAG CTGTTGCTGT TCGGCGGCGC GATCCAGATG
GCCGGCTCGG TGAAGGGCCG CAAGGCCGCC CGCCATGCCA CCTCGGACTG GATGGCGCTG
GAAAAGGAGC GCGGCATCTC GGTGACCTCC TCGGTGATGC AGTTCCCGTA CGAGGGCAAG
ATCGTCAACC TGCTCGACAC CCCCGGCCAC GCCGACTTCG GCGAGGACAC CTACCGCGTG
CTCACCGCGG TGGACTCGGC GCTGATGGTG ATCGACGTGG CCAAGGGCGT GGAAGAACGC
ACCATCAAGC TGATGGAAGT CTGCCGGCTG CGCGACACCC CCATCATGAC CTTCATCAAC
AAGCTCGATC GCGAGGGCAA GAACCCGATC GATCTGCTGG ATGAAGTGGA AACCGTGCTC
GGCATCCAAT GCGCGCCGGT CACCTGGCCG ATCGGCATGG GCCAGCGCCT CAAGGGCGTG
GTGCACCTGA TTTCCGGCGA AGTGCATCTG TACGAACAGG GGCGCAATTT CACCCGTCAG
GATTCCACCA TCTTCCCGTC GCTGGATGCG CCCGGCCTGG CCGAAAAGAT CGGCGAGCAG
ATGCTGACCG AGCTGCGCGA CGAGCTGGAA CTGGTGCAAG GCGCGAGCAA CCCGTTCGAT
CTGGATGCGT ATCGCGCCGG TCAACAGACC CCGGTGTTCT TCGGTTCGGG CGTCAACAAT
TTCGGCGTGC AACCACTGCT GGATTTCTTC ATCGAACACG CACCGCCGCC GCAAACGCGC
GAGACCACTG GCCGTCGCGT GGCGCCGAGC GAAACCAAAC TGAGCGGCTT CGTGTTCAAG
ATCCAGGCCA ACATGGACCC GCAGCATCGC GACCGCGTGG CGTTCATGCG CGTGTGCTCC
GGCAAGTTCA CAGCCGGCAT GAAGACGCTG CATGTGCGCA GCGGCAAGGA CGTCAAGCTG
GCCAATGCGT TGACCTTCAT GGCCTCCGAT CGCGAGATCG CCGCCGAAGC CTGGCCGGGC
GATGTCATCG GCATCCACAA CCATGGCACC ATCTCCATCG GCGACACGTT CACCGAAGGC
GAATCGCTGT CGTTCACCGG CATTCCCAAC TTCGCGCCGG AGCTGTTCCG CCGCGCGCGC
CTGCGCGACC CGCTCAAGCT CAAGCAATTG CAGAAGGGCC TGGCGCAGCT GTCCGAAGAA
GGTGCCACGC AGTTCTTCCG CCCGTTGATG AGCAACGATC TGATCCTGGG CGCGGTCGGC
GTGCTGCAGT TCGACGTCGT CGCGTATCGG CTCAAGGACG AATACGGCGT GGACGCGATC
TTCGAGCCGG TGAGCGTCAC CACGGCGCGC TGGGTGCACT GCGACAACGT CAAGAAGCTG
GACGAATTCC GCGAGAAAAA TGCCGGCAAT CTGGGCATCG ACGCCGCCGG CCAGCTGGTC
TACCTGGCAC CGACCCGGGT CAACCTGCAG CTGGCCCAGG AACGCGCGCC GGATGTGCGT
TTCTCGGCCA CCCGCGAACA CGTCCATGCC AAGGCGATCG ATTGA
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| Protein sequence | MSDVSNEAAR RRTFAIISHP DAGKTTLTEK LLLFGGAIQM AGSVKGRKAA RHATSDWMAL
EKERGISVTS SVMQFPYEGK IVNLLDTPGH ADFGEDTYRV LTAVDSALMV IDVAKGVEER
TIKLMEVCRL RDTPIMTFIN KLDREGKNPI DLLDEVETVL GIQCAPVTWP IGMGQRLKGV
VHLISGEVHL YEQGRNFTRQ DSTIFPSLDA PGLAEKIGEQ MLTELRDELE LVQGASNPFD
LDAYRAGQQT PVFFGSGVNN FGVQPLLDFF IEHAPPPQTR ETTGRRVAPS ETKLSGFVFK
IQANMDPQHR DRVAFMRVCS GKFTAGMKTL HVRSGKDVKL ANALTFMASD REIAAEAWPG
DVIGIHNHGT ISIGDTFTEG ESLSFTGIPN FAPELFRRAR LRDPLKLKQL QKGLAQLSEE
GATQFFRPLM SNDLILGAVG VLQFDVVAYR LKDEYGVDAI FEPVSVTTAR WVHCDNVKKL
DEFREKNAGN LGIDAAGQLV YLAPTRVNLQ LAQERAPDVR FSATREHVHA KAID
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